<?xml version="1.0" encoding="utf-8"?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1 plus MathML 2.0 plus SVG 1.1//EN" "http://www.w3.org/2002/04/xhtml-math-svg/xhtml-math-svg.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
  <head>
    <meta http-equiv="Content-Type" content="application/xhtml+xml; charset=utf-8"/>
    <title>Project-Team:GENSCALE</title>
    <link rel="stylesheet" href="../static/css/raweb.css" type="text/css"/>
    <meta name="description" content="Members"/>
    <meta name="dc.title" content="Members"/>
    <meta name="dc.creator" content="Dominique Lavenier"/>
    <meta name="dc.creator" content="Claire Lemaitre"/>
    <meta name="dc.creator" content="Pierre Peterlongo"/>
    <meta name="dc.creator" content="Guillaume Rizk"/>
    <meta name="dc.creator" content="Roumen Andonov"/>
    <meta name="dc.creator" content="Antonio Mucherino"/>
    <meta name="dc.creator" content="Fabrice Legeai"/>
    <meta name="dc.creator" content="Laurent Bouri"/>
    <meta name="dc.creator" content="Jennifer Del Giudice"/>
    <meta name="dc.creator" content="Patrick Durand"/>
    <meta name="dc.creator" content="Sebastien Letort"/>
    <meta name="dc.creator" content="Ivaylo Petrov"/>
    <meta name="dc.creator" content="Chloe Riou"/>
    <meta name="dc.creator" content="Gaetan Benoit"/>
    <meta name="dc.creator" content="Sebastien Francois"/>
    <meta name="dc.creator" content="Cervin Guyomar"/>
    <meta name="dc.creator" content="Antoine Limasset"/>
    <meta name="dc.creator" content="Camille Marchet"/>
    <meta name="dc.creator" content="Hoang Son Pham"/>
    <meta name="dc.creator" content="Warley Gramacho Da Silva"/>
    <meta name="dc.creator" content="Tristan Braquelaire"/>
    <meta name="dc.creator" content="Guillaume Chapuis"/>
    <meta name="dc.creator" content="Hristo Djidjev"/>
    <meta name="dc.creator" content="Marie Le Roic"/>
    <meta name="dc.creator" content="Charles Deltel"/>
    <meta name="dc.subject" content=""/>
    <meta name="dc.publisher" content="INRIA"/>
    <meta name="dc.date" content="(SCHEME=ISO8601) 2016-01"/>
    <meta name="dc.type" content="Report"/>
    <meta name="dc.language" content="(SCHEME=ISO639-1) en"/>
    <meta name="projet" content="GENSCALE"/>
    <script type="text/javascript" src="https://raweb.inria.fr/rapportsactivite/RA2016/static/MathJax/MathJax.js?config=TeX-MML-AM_CHTML">
      <!--MathJax-->
    </script>
  </head>
  <body>
    <div class="tdmdiv">
      <div class="logo">
        <a href="http://www.inria.fr">
          <img style="align:bottom; border:none" src="../static/img/icons/logo_INRIA-coul.jpg" alt="Inria"/>
        </a>
      </div>
      <div class="TdmEntry">
        <div class="tdmentete">
          <a href="uid0.html">Project-Team Genscale</a>
        </div>
        <span class="tdmActPage">
          <a href="uid1.html">Members</a>
        </span>
      </div>
      <div class="TdmEntry">Overall Objectives<ul><li><a href="./uid3.html">Optimization of genomic data processing</a></li><li><a href="./uid7.html">Active collaboration with life science actors</a></li></ul></div>
      <div class="TdmEntry">Research Program<ul><li><a href="uid11.html&#10;&#9;&#9;  ">Introduction</a></li><li><a href="uid12.html&#10;&#9;&#9;  ">Axis 1: HTS data processing</a></li><li><a href="uid13.html&#10;&#9;&#9;  ">Axis 2: Sequence comparison</a></li><li><a href="uid14.html&#10;&#9;&#9;  ">Axis 3: Protein 3D structure</a></li><li><a href="uid17.html&#10;&#9;&#9;  ">Axis 4: Parallelism</a></li></ul></div>
      <div class="TdmEntry">Application Domains<ul><li><a href="uid19.html&#10;&#9;&#9;  ">Introduction</a></li><li><a href="uid20.html&#10;&#9;&#9;  ">Health</a></li><li><a href="uid21.html&#10;&#9;&#9;  ">Agronomy and Environment</a></li></ul></div>
      <div class="TdmEntry">
        <a href="./uid23.html">Highlights of the Year</a>
      </div>
      <div class="TdmEntry">New Software and Platforms<ul><li><a href="uid27.html&#10;&#9;&#9;  ">AskOmics</a></li><li><a href="uid32.html&#10;&#9;&#9;  ">BBhash</a></li><li><a href="uid36.html&#10;&#9;&#9;  ">BCALM 2</a></li><li><a href="uid40.html&#10;&#9;&#9;  ">BGREAT</a></li><li><a href="uid44.html&#10;&#9;&#9;  ">GATB-Core</a></li><li><a href="uid48.html&#10;&#9;&#9;  ">GATB-Core Tutorial</a></li><li><a href="uid52.html&#10;&#9;&#9;  ">MindTheGap</a></li><li><a href="uid56.html&#10;&#9;&#9;  ">PLAST</a></li><li><a href="uid60.html&#10;&#9;&#9;  ">Simka</a></li><li><a href="uid64.html&#10;&#9;&#9;  ">short read connector</a></li></ul></div>
      <div class="TdmEntry">New Results<ul><li><a href="uid70.html&#10;&#9;&#9;  ">HTS data processing</a></li><li><a href="uid77.html&#10;&#9;&#9;  ">Sequence comparison</a></li><li><a href="uid80.html&#10;&#9;&#9;  ">Parallelism</a></li><li><a href="uid83.html&#10;&#9;&#9;  ">Data representation</a></li><li><a href="uid86.html&#10;&#9;&#9;  ">Applications</a></li></ul></div>
      <div class="TdmEntry">Bilateral Contracts and Grants with Industry<ul><li><a href="uid92.html&#10;&#9;&#9;  ">Bilateral Contracts with Industry</a></li><li><a href="uid94.html&#10;&#9;&#9;  ">Bilateral Grants with Industry</a></li></ul></div>
      <div class="TdmEntry">Partnerships and Cooperations<ul><li><a href="uid98.html&#10;&#9;&#9;  ">Regional Initiatives</a></li><li><a href="uid101.html&#10;&#9;&#9;  ">National Initiatives</a></li><li><a href="uid112.html&#10;&#9;&#9;  ">International Initiatives</a></li><li><a href="uid117.html&#10;&#9;&#9;  ">International Research Visitors</a></li></ul></div>
      <div class="TdmEntry">Dissemination<ul><li><a href="uid128.html&#10;&#9;&#9;  ">Promoting Scientific Activities</a></li><li><a href="uid190.html&#10;&#9;&#9;  ">Teaching - Supervision - Juries</a></li><li><a href="uid222.html&#10;&#9;&#9;  ">Popularization</a></li></ul></div>
      <div class="TdmEntry">
        <div>Bibliography</div>
      </div>
      <div class="TdmEntry">
        <ul>
          <li>
            <a id="tdmbibentmajor" href="bibliography.html">Major publications</a>
          </li>
          <li>
            <a id="tdmbibentyear" href="bibliography.html#year">Publications of the year</a>
          </li>
        </ul>
      </div>
    </div>
    <div id="main">
      <div class="mainentete">
        <div id="head_agauche">
          <small><a href="http://www.inria.fr">
	    
	    Inria
	  </a> | <a href="../index.html">
	    
	    Raweb 
	    2016</a> | <a href="http://www.inria.fr/en/teams/genscale">Presentation of the Project-Team GENSCALE</a> | <a href="http://team.inria.fr/genscale/">GENSCALE Web Site
	  </a></small>
        </div>
        <div id="head_adroite">
          <table class="qrcode">
            <tr>
              <td>
                <a href="genscale.xml">
                  <img style="align:bottom; border:none" alt="XML" src="../static/img/icons/xml_motif.png"/>
                </a>
              </td>
              <td>
                <a href="genscale.pdf">
                  <img style="align:bottom; border:none" alt="PDF" src="IMG/qrcode-genscale-pdf.png"/>
                </a>
              </td>
              <td>
                <a href="../genscale/genscale.epub">
                  <img style="align:bottom; border:none" alt="e-pub" src="IMG/qrcode-genscale-epub.png"/>
                </a>
              </td>
            </tr>
            <tr>
              <td/>
              <td>PDF
</td>
              <td>e-Pub
</td>
            </tr>
          </table>
        </div>
      </div>
      <!--FIN du corps du module-->
      <br/>
      <div class="bottomNavigation">
        <div class="tail_aucentre">
          <a href="./uid0.html" accesskey="P"><img style="align:bottom; border:none" alt="previous" src="../static/img/icons/previous_motif.jpg"/> Previous | </a>
          <a href="./uid0.html" accesskey="U"><img style="align:bottom; border:none" alt="up" src="../static/img/icons/up_motif.jpg"/>  Home</a>
          <a href="./uid3.html" accesskey="N"> | Next <img style="align:bottom; border:none" alt="next" src="../static/img/icons/next_motif.jpg"/></a>
        </div>
        <br/>
      </div>
      <div id="textepage"><div class="moreinfo1">Creation of the Team: 2012 January 01, updated into Project-Team: 2013 January 01</div><h2>Section: Members</h2><h3>Research Scientists</h3><span class="personbold">Dominique Lavenier</span> [<span style="color:black">Team leader, CNRS, Senior Researcher</span>, HDR] <br/><span class="personbold">Claire Lemaitre</span> [<span style="color:black">Inria, Researcher</span>] <br/><span class="personbold">Pierre Peterlongo</span> [<span style="color:black">Inria, Researcher</span>, HDR] <br/><span class="personbold">Guillaume Rizk</span> [<span style="color:black">Associate Researcher, ANR HydroGen</span>] <br/><h3>Faculty Members</h3><span class="personbold">Roumen Andonov</span> [<span style="color:black">Univ. Rennes I, Professor</span>, HDR] <br/><span class="personbold">Antonio Mucherino</span> [<span style="color:black">Univ. Rennes I, Associate Professor, until Aug 2016</span>] <br/><h3>Engineers</h3><span class="personbold">Fabrice Legeai</span> [<span style="color:black">Inra</span>] <br/><span class="personbold">Laurent Bouri</span> [<span style="color:black">CNRS</span>] <br/><span class="personbold">Jennifer Del Giudice</span> [<span style="color:black">Inria, from Mar 2016</span>] <br/><span class="personbold">Patrick Durand</span> [<span style="color:black">Inria</span>] <br/><span class="personbold">Sebastien Letort</span> [<span style="color:black">CNRS</span>] <br/><span class="personbold">Ivaylo Petrov</span> [<span style="color:black">Inria, until Jan 2016</span>] <br/><span class="personbold">Chloe Riou</span> [<span style="color:black">Inria, until Apr 2016</span>] <br/><span class="personbold">Charles Deltel</span> [<span style="color:black">Inria, Research engineer, 50% time dedicated to the GenScale project</span>] <br/><h3>PhD Students</h3><span class="personbold">Gaetan Benoit</span> [<span style="color:black">Inria, granted by Hydrogen ANR project</span>] <br/><span class="personbold">Sebastien Francois</span> [<span style="color:black">Univ. Rennes I</span>] <br/><span class="personbold">Cervin Guyomar</span> [<span style="color:black">Univ. Rennes I</span>] <br/><span class="personbold">Antoine Limasset</span> [<span style="color:black">Univ. Rennes I</span>] <br/><span class="personbold">Camille Marchet</span> [<span style="color:black">Univ. Rennes I</span>] <br/><span class="personbold">Hoang Son Pham</span> [<span style="color:black">Vietnam gov.</span>] <br/><h3>Post-Doctoral Fellow</h3><span class="personbold">Warley Gramacho Da Silva</span> [<span style="color:black">Tocantins University, Brazil, until Aug 2016</span>] <br/><h3>Visiting Scientists</h3><span class="personbold">Tristan Braquelaire</span> [<span style="color:black">Univ. Bordeaux I, from Mar 2016 until Apr 2016</span>] <br/><span class="personbold">Guillaume Chapuis</span> [<span style="color:black">LANL, Los Alamos, NM, USA, June 2016</span>] <br/><span class="personbold">Hristo Djidjev</span> [<span style="color:black">LANL, Los Alamos, NM, USA, June 2016</span>] <br/><h3>Administrative Assistant</h3><span class="personbold">Marie Le Roic</span> [<span style="color:black">Univ. Rennes I</span>] <br/></div>
      <!--FIN du corps du module-->
      <br/>
      <div class="bottomNavigation">
        <div class="tail_aucentre">
          <a href="./uid0.html" accesskey="P"><img style="align:bottom; border:none" alt="previous" src="../static/img/icons/previous_motif.jpg"/> Previous | </a>
          <a href="./uid0.html" accesskey="U"><img style="align:bottom; border:none" alt="up" src="../static/img/icons/up_motif.jpg"/>  Home</a>
          <a href="./uid3.html" accesskey="N"> | Next <img style="align:bottom; border:none" alt="next" src="../static/img/icons/next_motif.jpg"/></a>
        </div>
        <br/>
      </div>
    </div>
  </body>
</html>
