<?xml version="1.0" encoding="utf-8"?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1 plus MathML 2.0 plus SVG 1.1//EN" "http://www.w3.org/2002/04/xhtml-math-svg/xhtml-math-svg.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
  <head>
    <meta http-equiv="Content-Type" content="application/xhtml+xml; charset=utf-8"/>
    <title>Project-Team:CAPSID</title>
    <link rel="stylesheet" href="../static/css/raweb.css" type="text/css"/>
    <meta name="description" content="Computational Algorithms for Protein Structures and Interactions"/>
    <meta name="dc.title" content="Computational Algorithms for Protein Structures and Interactions"/>
    <meta name="dc.subject" content=""/>
    <meta name="dc.publisher" content="INRIA"/>
    <meta name="dc.date" content="(SCHEME=ISO8601) 2018-01"/>
    <meta name="dc.type" content="Report"/>
    <meta name="dc.language" content="(SCHEME=ISO639-1) en"/>
    <meta name="projet" content="CAPSID"/>
    <script type="text/javascript" src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-MML-AM_CHTML">
      <!--MathJax-->
    </script>
  </head>
  <body>
    <div class="tdmdiv">
      <div class="logo">
        <a href="http://www.inria.fr">
          <img style="align:bottom; border:none" src="../static/img/icons/logo_INRIA-coul.jpg" alt="Inria"/>
        </a>
      </div>
      <div class="TdmEntry">
        <div class="tdmentete">
          <a href="uid0.html">Project-Team Capsid</a>
        </div>
        <span>
          <a href="uid1.html">Team, Visitors, External Collaborators</a>
        </span>
      </div>
      <div class="TdmEntry">Overall Objectives<ul><li><a href="./uid3.html">Computational Challenges in Structural Biology</a></li></ul></div>
      <div class="TdmEntry">Research Program<ul><li><a href="uid9.html&#10;&#9;&#9;  ">Classifying and Mining Protein Structures and
Protein Interactions</a></li><li><a href="uid15.html&#10;&#9;&#9;  ">Integrative Multi-Component Assembly and Modeling</a></li></ul></div>
      <div class="TdmEntry">Application Domains<ul><li><a href="uid25.html&#10;&#9;&#9;  ">Biomedical Knowledge Discovery</a></li><li><a href="uid26.html&#10;&#9;&#9;  ">Prokaryotic Type IV Secretion Systems</a></li><li><a href="uid27.html&#10;&#9;&#9;  ">Protein-RNA Interactions</a></li></ul></div>
      <div class="TdmEntry">
        <a href="./uid29.html">Highlights of the Year</a>
      </div>
      <div class="TdmEntry">New Software and Platforms<ul><li><a href="uid31.html&#10;&#9;&#9;  ">Hex</a></li><li><a href="uid35.html&#10;&#9;&#9;  ">Kbdock</a></li><li><a href="uid39.html&#10;&#9;&#9;  ">Kpax</a></li><li><a href="uid42.html&#10;&#9;&#9;  ">Sam</a></li><li><a href="uid47.html&#10;&#9;&#9;  ">gEMfitter</a></li><li><a href="uid51.html&#10;&#9;&#9;  ">ECDM</a></li><li><a href="uid54.html&#10;&#9;&#9;  ">GODM</a></li><li><a href="uid57.html&#10;&#9;&#9;  ">BLADYG</a></li><li><a href="uid60.html&#10;&#9;&#9;  ">CGC</a></li><li><a href="uid63.html&#10;&#9;&#9;  ">GrAPFI</a></li><li><a href="uid66.html&#10;&#9;&#9;  ">Platforms</a></li></ul></div>
      <div class="TdmEntry">New Results<ul><li><a href="uid70.html&#10;&#9;&#9;  ">Drug Targeting and Adverse Drug Side Effects</a></li><li><a href="uid71.html&#10;&#9;&#9;  ">Docking Symmetrical Protein Structures</a></li><li><a href="uid72.html&#10;&#9;&#9;  ">Multiple Flexible Protein Structure Alignments</a></li><li><a href="uid73.html&#10;&#9;&#9;  ">Large-Scale Annotation of Protein Domains and Sequences</a></li><li><a href="uid74.html&#10;&#9;&#9;  ">Distributed Protein Graph Processing</a></li><li><a href="uid75.html&#10;&#9;&#9;  ">Flexible Docking of Protein-GAG Complexes</a></li><li><a href="uid76.html&#10;&#9;&#9;  ">Stochastic Decision Trees for Similarity Computation</a></li></ul></div>
      <div class="TdmEntry">Partnerships and Cooperations<ul><li><a href="uid78.html&#10;&#9;&#9;  ">Regional Initiatives</a></li><li><a href="uid84.html&#10;&#9;&#9;  ">National Initiatives</a></li><li><a href="uid92.html&#10;&#9;&#9;  ">International Initiatives</a></li><li><a href="uid100.html&#10;&#9;&#9;  ">International Research Visitors</a></li></ul></div>
      <div class="TdmEntry">Dissemination<ul><li><a href="uid104.html&#10;&#9;&#9;  ">Promoting Scientific Activities</a></li><li><a href="uid116.html&#10;&#9;&#9;  ">Teaching - Supervision - Juries</a></li></ul></div>
      <div class="TdmEntry">
        <div>Bibliography</div>
      </div>
      <div class="TdmEntry">
        <ul>
          <li>
            <a id="tdmbibentmajor" href="bibliography.html">Major publications</a>
          </li>
          <li>
            <a id="tdmbibentyear" href="bibliography.html#year">Publications of the year</a>
          </li>
          <li>
            <a id="tdmbibentfoot" href="bibliography.html#References">References in notes</a>
          </li>
        </ul>
      </div>
    </div>
    <div id="main">
      <div class="mainentete">
        <div id="head_agauche">
          <small><a href="http://www.inria.fr">
	    
	    Inria
	  </a> | <a href="../index.html">
	    
	    Raweb 
	    2018</a> | <a href="http://www.inria.fr/en/teams/capsid">Presentation of the Project-Team CAPSID</a> | <a href="http://capsid.loria.fr/">CAPSID Web Site
	  </a></small>
        </div>
        <div id="head_adroite">
          <table class="qrcode">
            <tr>
              <td>
                <a href="capsid.xml">
                  <img style="align:bottom; border:none" alt="XML" src="../static/img/icons/xml_motif.png"/>
                </a>
              </td>
              <td>
                <a href="capsid.pdf">
                  <img style="align:bottom; border:none" alt="PDF" src="IMG/qrcode-capsid-pdf.png"/>
                </a>
              </td>
              <td>
                <a href="../capsid/capsid.epub">
                  <img style="align:bottom; border:none" alt="e-pub" src="IMG/qrcode-capsid-epub.png"/>
                </a>
              </td>
            </tr>
            <tr>
              <td/>
              <td>PDF
</td>
              <td>e-Pub
</td>
            </tr>
          </table>
        </div>
      </div>
      <!--FIN du corps du module-->
      <br/>
      <div class="bottomNavigation">
        <div class="tail_aucentre">
          <a href="./uid0.html" accesskey="U"><img style="align:bottom; border:none" alt="up" src="../static/img/icons/up_motif.jpg"/>  Home</a>
          <a href="./uid1.html" accesskey="N"> | Next <img style="align:bottom; border:none" alt="next" src="../static/img/icons/next_motif.jpg"/></a>
        </div>
        <br/>
      </div>
      <!--DEBUT1 du corps du module-->
      <div class="mainpage1">
        <div class="Titrepage1">2018 Project-Team Activity Report
	</div>
        <div class="Projetpage1">
          <div class="ProjetCourtpage1">CAPSID</div>
          <div class="ProjetLongpage1">Computational Algorithms for Protein Structures and Interactions<div class="DescriptionTeam"/></div>
        </div>
        <div class="CRpage1">
          <span class="definition">Research centre: </span>
          <a href="http://www.inria.fr/centre/nancy">Nancy - Grand Est</a>
        </div>
        <div class="partner"><span class="definition">In partnership with: </span>CNRS, Université de Lorraine<br/><span class="definition">In collaboration with: </span>Laboratoire lorrain de recherche en informatique et ses applications (LORIA)<br/><br/></div>
        <div class="domainepage1"><span class="definition">Field: </span><a href="&#10;&#9;      http://www.inria.fr/en/domains/Digital-Health-Biology-and-Earth">Digital Health, Biology and Earth</a><br/><span class="definition">Theme: </span>Computational Biology</div>
        <div class="Keywordspage">
          <span class="definition">Keywords: </span>
        </div>
        <div class="Keywordspage1">
          <span class="definition2">
            <a href="/keywords/2018/computing">Computer Science and Digital Science: </a>
          </span>
          <ul>
            <li>A1.5.1. - Systems of systems</li>
            <li>A3.1.1. - Modeling, representation</li>
            <li>A3.2.2. - Knowledge extraction, cleaning</li>
            <li>A3.2.5. - Ontologies</li>
            <li>A6.1.5. - Multiphysics modeling</li>
          </ul>
        </div>
        <div class="Keywordspage2">
          <span class="definition2">
            <a href="/keywords/2018/other">Other Research Topics and Application Domains: </a>
          </span>
          <ul>
            <li>B1.1.1. - Structural biology</li>
            <li>B1.1.2. - Molecular and cellular biology</li>
            <li>B1.1.7. - Bioinformatics</li>
            <li>B2.2.1. - Cardiovascular and respiratory diseases</li>
            <li>B2.2.4. - Infectious diseases, Virology</li>
          </ul>
        </div>
      </div>
    </div>
  </body>
</html>
