Bibliography

Major publications by the team in recent years

• 1L. Boudin, L. Desvillettes, C. Grandmont, A. Moussa.
  Global existence of solutions for the coupled Vlasov and Navier-Stokes equations, in: Differential and integral equations, November 2009, vol. 22, n^o 11-12, pp. 1247-1271.
  https://hal.archives-ouvertes.fr/hal-00331895
• 2L. Boudin, B. Grec, F. Salvarani.
  A mathematical and numerical analysis of the Maxwell-Stefan diffusion equations, in: Discrete and Continuous Dynamical Systems - Series B, 2012, vol. 17, n^o 5, pp. 1427-1440. [ DOI : 10.3934/dcdsb.2012.17.1427 ]
  https://hal.archives-ouvertes.fr/hal-00490511
• 3M. Boulakia, S. Cazeau, M. A. Fernández, J.-F. Gerbeau, N. Zemzemi.
  Mathematical Modeling of Electrocardiograms: A Numerical Study, in: Annals of Biomedical Engineering, 2010, vol. 38, n^o 3, pp. 1071-1097. [ DOI : 10.1007/s10439-009-9873-0 ]
  https://hal.inria.fr/inria-00400490
• 4M. Boulakia, S. Guerrero.
  Regular solutions of a problem coupling a compressible fluid and an elastic structure, in: Journal de Mathématiques Pures et Appliquées, 2010, vol. 94, n^o 4, pp. 341-365. [ DOI : 10.1016/j.matpur.2010.04.002 ]
  https://hal.inria.fr/hal-00648710
• 5J. Christophe, T. Ishikawa, N. Matsuki, Y. Imai, K. Takase, M. Thiriet, T. Yamaguchi.
  Patient-specific morphological and blood flow analysis of pulmonary artery in the case of severe deformations of the lung due to pneumothorax, in: Journal of Biomechanical Science and Engineering, 2010, vol. 5, n^o 5, pp. 485-498.
  https://hal.inria.fr/inria-00543090
• 6M. A. Fernández, J. Mullaert, M. Vidrascu.
  Explicit Robin-Neumann schemes for the coupling of incompressible fluids with thin-walled structures, in: Computer Methods in Applied Mechanics and Engineering, 2013, vol. 267, pp. 566-593. [ DOI : 10.1016/j.cma.2013.09.020 ]
  https://hal.inria.fr/hal-00784903
• 7J.-F. Gerbeau, D. Lombardi.
  Approximated Lax Pairs for the Reduced Order Integration of Nonlinear Evolution Equations, in: Journal of Computational Physics, May 2014, vol. 265, pp. 246-269. [ DOI : 10.1016/j.jcp.2014.01.047 ]
  https://hal.inria.fr/hal-00933172
• 8C. Grandmont, M. Hillairet.
  Existence of global strong solutions to a beam-fluid interaction system, in: Archive for Rational Mechanics and Analysis, 2016. [ DOI : 10.1007/s00205-015-0954-y ]
  https://hal.inria.fr/hal-01138736
• 9P. Moireau, C. Bertoglio, N. Xiao, C. A. Figueroa, C. Taylor, D. Chapelle, J.-F. Gerbeau.
  Sequential identification of boundary support parameters in a fluid-structure vascular model using patient image data, in: Biomechanics and Modeling in Mechanobiology, July 2012, vol. 12, n^o 3, pp. 475-496. [ DOI : 10.1007/s10237-012-0418-3 ]
  https://hal.inria.fr/hal-00760703
• 10S. Pant, B. Fabrèges, J.-F. Gerbeau, I. Vignon-Clementel.
  A methodological paradigm for patient-specific multi-scale CFD simulations: from clinical measurements to parameter estimates for individual analysis, in: International Journal for Numerical Methods in Biomedical Engineering, December 2014, vol. 30, n^o 12, pp. 1614–1648. [ DOI : 10.1002/cnm.2692 ]
  https://hal.inria.fr/hal-01093879
• 11I. Vignon-Clementel, A. Marsden, J. Feinstein.
  A Primer on Computational Simulation in Congenital Heart Disease for the Clinician, in: Progress in Pediatric Cardiology, 2010, vol. 30, n^o 1-2, pp. 3-13, Fondation Leducq. [ DOI : 10.1016/j.ppedcard.2010.09.002 ]
  https://hal.inria.fr/inria-00542957

Publications of the year

Doctoral Dissertations and Habilitation Theses

• 12M. Landajuela Larma.
  Coupling schemes and unfitted mesh methods for fluid-structure interaction, Université Pierre et Marie Curie - Paris VI, March 2016.
  https://tel.archives-ouvertes.fr/tel-01366696
• 13I. Vignon-Clementel.
  Blood and air flow multi-scale simulations based on real data, UPMC - Paris 6 Sorbonne Universités, March 2016, Habilitation à diriger des recherches.
  https://hal.inria.fr/tel-01418167

Articles in International Peer-Reviewed Journals

• 14F. Alauzet, B. Fabrèges, M. A. Fernández, M. Landajuela.
  Nitsche-XFEM for the coupling of an incompressible fluid with immersed thin-walled structures, in: Computer Methods in Applied Mechanics and Engineering, January 2016, vol. 301, pp. 300-335. [ DOI : 10.1016/j.cma.2015.12.015 ]
  https://hal.inria.fr/hal-01149225
• 15M. Aletti, J.-F. Gerbeau, D. Lombardi.
  A simplified fluid-structure model for arterial flow. Application to retinal hemodynamics, in: Computational Methods in Applied Mechanics and Engineering, 2016, vol. 306, pp. 77-94. [ DOI : 10.1016/j.cma.2016.03.044 ]
  https://hal.archives-ouvertes.fr/hal-01296940
• 16G. Arbia, I. Vignon-Clementel, T.-Y. Hsia, J.-F. Gerbeau.
  Modified Navier-Stokes equations for the outflow boundary conditions in hemodynamics, in: European Journal of Mechanics - B/Fluids, June 2016. [ DOI : 10.1016/j.euromechflu.2016.06.001 ]
  https://hal.archives-ouvertes.fr/hal-01328501
• 17C. Audebert, M. Bekheit, P. Bucur, E. Vibert, I. Vignon-Clementel.
  Partial hepatectomy hemodynamics changes: Experimental data explained by closed-loop lumped modeling, in: Journal of Biomechanics, November 2016. [ DOI : 10.1016/j.jbiomech.2016.11.037 ]
  https://hal.archives-ouvertes.fr/hal-01404771
• 18C. Audebert, P. Bucur, M. Bekheit, E. Vibert, I. Vignon-Clementel, J.-F. Gerbeau.
  Kinetic scheme for arterial and venous blood flow, and application to partial hepatectomy modeling, in: Computer Methods in Applied Mechanics and Engineering, February 2017, vol. 314, pp. 102-125. [ DOI : 10.1016/j.cma.2016.07.009 ]
  https://hal.archives-ouvertes.fr/hal-01347500
• 19F. Bonaldi, G. Geymonat, F. Krasucki, M. Vidrascu.
  Mathematical and numerical modeling of plate dynamics with rotational inertia, in: AACE Journal, 2016, pp. 1 - 20.
  https://hal.inria.fr/hal-01413037
• 20L. Boudin, F. Salvarani.
  Opinion dynamics: kinetic modelling with mass media, application to the Scottish independence referendum, in: Physica A, 2016, vol. 444, pp. 448-457. [ DOI : 10.1016/j.physa.2015.10.014 ]
  https://hal.archives-ouvertes.fr/hal-01114091
• 21M. Boulakia.
  Quantification of the unique continuation property for the nonstationary Stokes problem, in: Mathematical Control and Related Fields, March 2016.
  https://hal.inria.fr/hal-01094490
• 22P. Bucur, M. Bekheit, C. Audebert, I. E. Vignon-Clementel, E. Vibert.
  Simplified technique for 75% and 90% hepatic resection with hemodynamic monitoring in large white swine model, in: Journal of Surgical Research, 2017. [ DOI : 10.1016/j.jss.2016.09.018 ]
  https://hal.archives-ouvertes.fr/hal-01405171
• 23E. Burman, A. Ern, M. A. Fernández.
  Fractional-step methods and finite elements with symmetric stabilization for the transient Oseen problem, in: ESAIM: Mathematical Modelling and Numerical Analysis, April 2016. [ DOI : 10.1051/m2an/2016028 ]
  https://hal.inria.fr/hal-01218328
• 24A. Caiazzo, R. Guibert, I. E. Vignon-Clementel.
  A reduced-order modeling for efficient design study of artificial valve in enlarged ventricular outflow tracts, in: Computer Methods in Biomechanics and Biomedical Engineering, 2016, vol. 19, n^o 12, pp. 1314 - 1318. [ DOI : 10.1080/10255842.2015.1133811 ]
  https://hal.inria.fr/hal-01414386
• 25I. Cavero, J.-M. Guillon, V. Ballet, M. Clements, J.-F. Gerbeau, H. Holzgrefe.
  Comprehensive in vitro Proarrhythmia Assay (CiPA): Pending issues for successful validation and implementation, in: Journal of Pharmacological and Toxicological Methods, 2016. [ DOI : 10.1016/j.vascn.2016.05.012 ]
  https://hal.inria.fr/hal-01328481
• 26Y. Deleuze, M. Thiriet, T. W. Sheu.
  On three-dimensional ALE finite element model for simulating deformed interstitial medium in the presence of a moving needle, in: Computers and Fluids, 2016. [ DOI : 10.1016/j.compfluid.2016.08.001 ]
  http://hal.upmc.fr/hal-01355051
• 27M. A. Fernández, J. Mullaert.
  Convergence and error analysis for a class of splitting schemes in incompressible fluid-structure interaction, in: IMA Journal of Numerical Analysis, October 2016, vol. 36, n^o 4, pp. 1748-1782. [ DOI : 10.1093/imanum/drv055 ]
  https://hal.inria.fr/hal-01102975
• 28C. Grandmont, M. Hillairet.
  Existence of global strong solutions to a beam-fluid interaction system, in: Archive for Rational Mechanics and Analysis, 2016. [ DOI : 10.1007/s00205-015-0954-y ]
  https://hal.inria.fr/hal-01138736
• 29N. Jagiella, B. Müller, M. Müller, I. E. Vignon-Clementel, D. Drasdo.
  Inferring Growth Control Mechanisms in Growing Multi-cellular Spheroids of NSCLC Cells from Spatial-Temporal Image Data, in: PLoS Computational Biology, 2016, vol. 12, n^o 2, e1004412. [ DOI : 10.1371/journal.pcbi.1004412 ]
  http://hal.upmc.fr/hal-01244593
• 30M. Landajuela, M. Vidrascu, D. Chapelle, M. A. Fernández.
  Coupling schemes for the FSI forward prediction challenge: comparative study and validation, in: International Journal for Numerical Methods in Biomedical Engineering, June 2016. [ DOI : 10.1002/cnm.2813 ]
  https://hal.inria.fr/hal-01239931
• 31D. Lombardi, S. Pant.
  A non-parametric k-nearest neighbor entropy estimator, in: Physical Reviev E, January 2016. [ DOI : 10.1103/PhysRevE.93.013310 ]
  https://hal.inria.fr/hal-01272527
• 32O. Miraucourt, S. Salmon, M. SZOPOS, M. Thiriet.
  Blood flow in the cerebral venous system: modeling and simulation, in: Computer Methods in Biomechanics and Biomedical Engineering, 2016. [ DOI : 10.1080/10255842.2016.1247833 ]
  http://hal.upmc.fr/hal-01384285
• 33J. M. Oakes, P. Hofemeier, I. Vignon-Clementel, J. Sznitman.
  Aerosols in Healthy and Emphysematous In Silico Pulmonary Acinar Rat Models, in: Journal of Biomechanics, 2016, vol. 49, n^o 11, pp. 2213-2220. [ DOI : 10.1016/j.jbiomech.2015.11.026 ]
  https://hal.inria.fr/hal-01244458
• 34J. M. Oakes, S. C. Shadden, C. Grandmont, I. Vignon-Clementel.
  Aerosol Transport Throughout Inspiration and Expiration in the Pulmonary Airways, in: International Journal for Numerical Methods in Biomedical Engineering, 2016.
  https://hal.inria.fr/hal-01413455
• 35S. Pant, C. Corsini, C. Baker, T.-Y. Hsia, G. Pennati, I. Vignon-Clementel.
  Data assimilation and modelling of patient-specific single-ventricle physiology with and without valve regurgitation, in: Journal of Biomechanics, July 2016, vol. 49, n^o 11, pp. 2162–2173. [ DOI : 10.1016/j.jbiomech.2015.11.030 ]
  https://hal.inria.fr/hal-01240146
• 36S. Pant, C. Corsini, C. Baker, T.-Y. Hsia, G. Pennati, I. Vignon-Clementel.
  Inverse problems in reduced order models of cardiovascular haemodynamics: aspects of data-assimilation and heart-rate variability, in: Journal of the Royal Society Interface, 2017.
  https://hal.inria.fr/hal-01413446
• 37E. Schenone, A. Collin, J.-F. Gerbeau.
  Numerical simulation of electrocardiograms for full cardiac cycles in healthy and pathological conditions, in: International Journal for Numerical Methods in Biomedical Engineering, May 2016, vol. 32, n^o 5, In press (in International Journal for Numerical Methods in Biomedical Engineering). [ DOI : 10.1002/cnm.2744 ]
  https://hal.inria.fr/hal-01184744
• 38W. Yang, J. A. Feinstein, I. E. Vignon-Clementel.
  Adaptive outflow boundary conditions improve post-operative predictions after repair of peripheral pulmonary artery stenosis, in: Biomechanics and Modeling in Mechanobiology, 2016, vol. 15, n^o 5, pp. 1345-1353. [ DOI : 10.1007/s10237-016-0766-5 ]
  https://hal.inria.fr/hal-01414295

Articles in National Peer-Reviewed Journals

• 39E. Vibert, I. Vignon-Clementel, D. Samuel.
  Prévention de l’insuffisance hépatique post-opératoire par modulation pneumatique de la veine porte, in: Hépato-Gastro & Oncologie Digestive, January 2016, vol. 23, n^o 1, pp. 90-4. [ DOI : 10.1684/hpg.2015.1250 ]
  https://hal.inria.fr/hal-01414577

International Conferences with Proceedings

• 40Y. Yin, O. Sedlaczek, J. Lotz, J. Olesch, K. Breuhahn, D. Drasdo, I. Vignon-Clementel.
  Tumor Microvasculature in Lung Cancer and Diffusion-Weighted MRI: Preliminary Results, in: IEEE Nuclear Science Symposuim & Medical Imaging Conference, Strasbourg, France, October 2016.
  https://hal.inria.fr/hal-01421152
• 41Y. Yin, O. Sedlaczek, A. Warth, M. González-Vallinas, K. Breuhahn, I. Vignon-Clementel, D. Drasdo.
  Quantitative Estimation of Tumor Cellularity Based on Histology Data, in: IEEE Nuclear Science Symposuim & Medical Imaging Conference, Oct 2016, Strasbourg, France, October 2016.
  https://hal.inria.fr/hal-01421163

Scientific Books (or Scientific Book chapters)

• 42Y. Deleuze, M. Thiriet, T. W. Sheu.
  On Three-Dimensional ALE Finite Element Model For Simulating Interstitial Medium Deformation in the Presence of a Moving Needle, in: Advances in Computational Fluid-Structure Interaction and Flow Simulation, Y. Bazilevs, K. Takizawa (editors), Birkhäuser Basel, October 2016. [ DOI : 10.1007/978-3-319-40827-9_27 ]
  http://hal.upmc.fr/hal-01240292
• 43M. Thiriet, W.-H. Sheu, A. Garon.
  Biofluid Flow and Heat Transfer, in: Handbook of Fluid Dynamics, R. W. Johnson (editor), CRC Press, 2016, 2nd Edition. [ DOI : 10.1201/b19031-35 ]
  http://hal.upmc.fr/hal-01393604

Internal Reports

• 44M. A. Fernández, M. Landajuela.
  Unfitted mesh formulations and splitting schemes for incompressible fluid/thin-walled structure interaction, Inria, April 2016, n^o RR-8908.
  https://hal.inria.fr/hal-01309462

Other Publications

• 45M. Aletti, D. Lombardi.
  A Reduced Order representation of the Poincaré-Steklov operator: an application to coupled multi-physics problems, November 2016, working paper or preprint.
  https://hal-auf.archives-ouvertes.fr/hal-01396286
• 46L. Boudin, C. Grandmont, A. Moussa.
  Global existence of solutions to the incompressible Navier-Stokes-Vlasov equations in a time-dependent domain, May 2016, working paper or preprint.
  https://hal.inria.fr/hal-01312262
• 47L. Boudin, B. Grec, V. Pavan.
  The Maxwell-Stefan diffusion limit for a kinetic model of mixtures with general cross sections, April 2016, working paper or preprint.
  https://hal.inria.fr/hal-01303312
• 48J. Bouyssier, M. Bendahmanne, Y. Coudière, J.-F. Gerbeau, J. Pedron, P. Zitoun, N. Zemzemi.
  Parameters estimation approach for the MEA/hiPSC-CM assays, September 2016, Journées scientifiques du LIRYC, Poster.
  https://hal.inria.fr/hal-01409683
• 49V. Ehrlacher, D. Lombardi.
  A dynamical adaptive tensor method for the Vlasov-Poisson system, June 2016, working paper or preprint.
  https://hal.archives-ouvertes.fr/hal-01335507
• 50J.-F. Gerbeau, D. Lombardi, E. Schenone.
  Approximated lax pairs and empirical interpolation for nonlinear parabolic partial differential equations , February 2016, working paper or preprint.
  https://hal.inria.fr/hal-01278778
• 51J.-F. Gerbeau, D. Lombardi, E. Tixier.
  A moment-matching method to study the variability of phenomena described by partial differential equations, November 2016, working paper or preprint.
  https://hal.archives-ouvertes.fr/hal-01391254
• 52N. Pozin, S. Montesantos, I. Katz, M. Pichelin, I. E. Vignon-Clementel, C. Grandmont.
  A tree-parenchyma coupled model for lung ventilation simulation, September 2016, working paper or preprint.
  https://hal.archives-ouvertes.fr/hal-01407055
• 53Y. Yin, O. Sedlaczek, B. Müller, A. Warth, M. González-Vallinas, B. Lahrmann, N. Grabe, H.-U. Kauczor, K. Breuhahn, I. Vignon-Clementel, D. Drasdo.
  Tumor cell load and heterogeneity estimation from diffusion-weighted MRI calibrated with histological data: an example from lung cancer, December 2016, working paper or preprint.
  https://hal.inria.fr/hal-01421398

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