Section: Dissemination
Teaching - Supervision - Juries
Teaching
The members of BAMBOO teach both at the Department of Biology of the University of Lyon (in particular within the MIV (Mathematics and Computer Science for the Life Sciences) specialty) and at the department of Bioinformatics of the Insa (National Institute of Applied Sciences). Cristina Vieira is responsible for the Evolutionary Genetics and Genomics academic career of the Master Ecosciences-Microbiology. She was awarded an IUF (Institut Universitaire de France) distinction and teaches genetics 64 hours per year at the University and École Normale Supérieure. Hubert Charles is responsible for the Master of Modelling and Bioinformatics (BIM) at the Insa of Lyon. He teaches 192 hours per year in statistics and biology. Vincent Lacroix is responsible for several courses both at the University (L2 Bioinformatics, L3 Advanced Bioinformatics) and at the Insa (M1: Gene Expression, M2:Introduction to Bioinformatics for Biochemists). He teaches 192 hours per year, except in 2012-2013 where he taught 96 hours as he had a partial sabbatical funded by Inria (through the ERC AdG Sisyphe grant) for one semester. He teaches bioinformatics and statistics.
Two PhD students in BAMBOO were able to teach by applying to a monitorat (mentoring program – 64 hours per year). Cecilia Klein taught 64 hours in 2012-2013 at the Department of Biology (L2: Bioinformatics). Two other PhD students taught more occasionally in 2012-2013: Gustavo Sacomoto taught 12 hours of graph algorithms at the Department of Biology (M1: Bioinformatics), and Mariana Ferrarini taught 23 hours at the Department of Biology (L3: Bioinformatics). The postdocs are also involved in teaching. Blerina Sinaimeri thus taught 8 hours of graph algorithms, Lilia Brinza 40 hours of bioinformatics at the Insa, and Christian Baudet taught 12 hours of bioinformatics at the University.
All members of the BAMBOO team are affiliated to the doctoral school E2M2 (Ecology-Evolution-Microbiology-Modelling). Hubert Charles is the vice-director of the school.
Supervision
The following is the PhD defended in BAMBOO in 2013.
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PhD: Cecilia Klein, University of Lyon 1, November 12, supervisors A. T. Vasconcelos and M.-F. Sagot.
Juries
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M.-F. Sagot: Reviewer of the HDR of Andrei Zinovyev (ENS Paris), and of the PhD of Kalle Karhu (University of Helsinki, Finland).
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C. Vieira: Reviewer of the PhD of Jonathan Grandaubert (University Paris 11), member of the PhD committee of Eugenia Pessia (University of Lyon), reviewer of the HDR of Karine Alix (AgroParisTech).