Section: New Software and Platforms

KBDOCK

Keywords: Protein Binding Sites

Scientific Description

KBDOCK is a database of all known protein-protein interactions that have experimentally determined 3D structures. In 2015, we used the latest version of KBDOCK in several rounds of the community-wide “CAPRI” blind docking experiment [36] . A journal article has been accepted for publication in Proteins.

Functional Description

KBDOCK combines coordinate data from the PDB with the Pfam protein domain family classification [28] in order to describe and analyze all known protein-protein interactions for which the 3D structures are available.

• Contact: David Ritchie

• URL: http://kbdock.loria.fr