Section: New Software and Platforms

C3Part & Isofun

Functional Description

The C3Part / Isofun package implements a generic approach to the local alignment of two or more graphs representing biological data, such as genomes, metabolic pathways or protein-protein interactions, in order to infer a functional coupling between them. It is based on the notion of “common connected components” between graphs.

• Participants: Frédéric Boyer, Yves-Pol Deniélou, Anne Morgat, Marie-France Sagot and Alain Viari

• Contact: Alain Viari

• URL: http://www.inrialpes.fr/helix/people/viari/lxgraph/index.html