Section: New Software and Platforms

KisSplice2RefTranscriptome

Functional Description

KisSplice2RefTranscriptome enables to combine the output of KisSplice with the output of a full-length transcriptome assembler, thus allowing to predict a functional impact for the positioned SNPs, and to intersect these results with condition-specific SNPs. Overall, starting from RNAseq data only, we obtain a list of condition-specific SNPs stratified by functional impact.

• Participants: Mathilde Boutigny, Vincent Lacroix, Hélène Lopez-Maestre

• Contact: Vincent Lacroix

• URL: http://kissplice.prabi.fr/tools/kiss2rt/