Section: Dissemination

Research

Scientific events: organizing committees

Member of organizing committees

Table 11.

IBIS members	Conference, workshop, school	Date
Eugenio Cinquemani	Fifth International Workshop on Hybrid Systems Biology (HSB 2016), Grenoble	October 2017
Hidde de Jong	CompSysBio: Advanced Lecture Course on Computational Systems Biology, Aussois	March 2017
Delphine Ropers	Séminaire de Modélisation du Vivant (SeMoVi), Lyon and Grenoble	2016

Scientific events: selection committees

Chair of conference program committees

Table 12.

IBIS member	Conference, workshop, school	Role
Eugenio Cinquemani	European Control Conference (ECC 2016)	Associate editor
Eugenio Cinquemani	Fifth International Workshop on Hybrid Systems Biology (HSB 2016)	Program chair
Hidde de Jong	International Conference on Intelligent Systems in Molecular Biology (ISMB 2016)	Area chair

Member of conference program committees

Table 13.

IBIS member	Conference, workshop, program
Eugenio Cinquemani	HSB 2016, SASB 2016
Hidde de Jong	ISMB 2016, ECCB 2016, HSB 2016, FOSBE 2016
Delphine Ropers	JOBIM 2017

Journals

Member of editorial boards

Table 14.

IBIS member	Journal
Johannes Geiselmann	Frontiers in Microbiology (review editor)
Hidde de Jong	Journal of Mathematical Biology
Hidde de Jong	Biosystems
Hidde de Jong	ACM/IEEE Transactions on Computational Biology and Bioinformatics

Scientific evaluation and expertise

Table 15.

IBIS member	Organism	Role
Johannes Geiselmann	BGene	Member scientific advisory board
Johannes Geiselmann	ANR	Member of selection committee
Johannes Geiselmann	INRA	Member of scientific advisory committee Microbiologie, Adaptation, Pathogénie
Johannes Geiselmann	UMR5240 CNRS-UCBL-INSA-BayerCropScience	Member scientific council
Johannes Geiselmann	ARC1, Rhône-Alpes region	Member scientific committee
Hidde de Jong	International Human Frontier Science Program (HFSP)	Member selection and review committees
Hidde de Jong	Microbiology and Food Chain Department, Inra	Member scientific council
Hidde de Jong	BGene	Member scientific advisory board
Hidde de Jong	HCERES	Member of evaluation committee of TAGC laboratory (UMR U1090), Marseille

Recruitment committees

Table 16.

IBIS member	Organism	Recruitment
Hidde de Jong	Université Pierre et Marie Curie, Paris	Full professors in systems biology, applied to microbiology and to physiology
Delphine Ropers	Inria Lille	Chargés de recherche (jury d'admissibilité)
Delphine Ropers	Inria	Chargés de recherche (jury d'admission)
Delphine Ropers	INSA de Lyon	Assistant professor

Invited talks

Eugenio Cinquemani

Table 17.

Title	Event and location	Date
Reconstruction of promoter activity statistics from reporter protein population snapshot data	Seminar at Control theory and systems biology laboratory, D-BSSE, Basel, Switzerland	January 2016
Identifying variability of gene expression dynamics from time-course data	Seminar at IBM Research Center, Zurich, Switzerland	January 2016
Reconstruction of promoter activity statistics from reporter protein population snapshot data	Seminar at Automatic control laboratory, ETH Zurich, Switzerland	January 2016
Inference of regulatory networks from time-series reporter gene data: The case of promoter regulation in the E. coli motility network	Invited talk at workshop on Static Analysis in Systems Biology (SASB 2016), Edinburgh, UK	September 2016
On observability and reconstruction of promoter activity statistics from reporter protein mean and variance profiles	Presentation at 5th International Workshop on Hybrid Systems Biology (HSB 2016), Grenoble	October 2016

Hidde de Jong

Table 18.

Title	Event and location	Date
Natural and synthetic control of growth rate and gene expression in bacteria	Seminar Centre de Biologie Intégrative de Toulouse	February 2016
Natural and synthetic control of resource allocation in bacteria	Seminar MIRA institute, University of Twente, the Netherlands	July 2016
A synthetic growth switch based on controlled expression of RNA polymerase	Presentation at 17th International Conference on Systems Biology (ICSB 2016), Barcelona, Spain	October 2016
Natural and synthetic control of resource allocation in bacteria	Journée Biologie des systémes BiLille, Lille	November 2016

Johannes Geiselmann

Table 19.

Title	Event and location	Date
Growth control in bacteria	Seminar at CPBS Montpellier	June 2016

Nils Giordano

Table 20.

Title	Event and location	Date
Dynamical allocation of cellular resources as an optimal control problem: Novel insights into microbial growth strategies	Talk during annual meeting of working group GT-BIOSS, Lyon	July 2016

Stephan Lacour

Table 21.

Title	Event and location	Date
Direct versus indirect gene regulation by the stress response SigmaS factor	Seminar Institut de Biologie Structurale, Grenoble	February 2016
Identification of novel curli regulators in Escherichia coli	Poster at Biofilms7, Porto, Portugal	June 2016
Quantification of non-coding RNAs in bacterial cells using a Broccoli aptamer	Poster at 8th Bordeaux RNA Club Symposium & Aptamers in Bordeaux	June 2016

Aline Métris

Table 22.

Title	Event and location	Date
What does it take for a foodborne pathogen to survive a pinch of salt? Bioinformatics and systems biology approaches to model food safety	Invited researcher seminar Inria Grenoble - Rhône-Alpes	December 2016
Modèles et –omics pour mieux comprendre la réponse des pathogènes alimentaires au stress osmotique	INRA Avignon	December 2016

Delphine Ropers

Table 23.

Title	Event and location	Date
Adaptation of E. coli growth to environmental cues: global control of gene expression and post-transcriptional regulations	Institute for Food Research, Norwich, UK	March 2016
Adaptation of E. coli growth to environmental cues: global control of gene expression and post-transcriptional regulations	Journées INRA-Inria, Mallemort	October 2016

Research administration

Table 24.

IBIS member	Committee	Role
Eugenio Cinquemani	Inria Grenoble - Rhône-Alpes	Member Comité des Emplois Scientifiques (CES)
Eugenio Cinquemani	Inria Grenoble - Rhône-Alpes	Member Comité des Utilisateurs des Moyens Informatiques (CUMI)
Eugenio Cinquemani	Inria	Member Comité Administrative Paritaire (CAP)
Johannes Geiselmann	Department of Biology, Université Grenoble Alpes	Member scientific council
Hidde de Jong	Inria Grenoble - Rhône-Alpes	Member scientific council
Hidde de Jong	Inria	Member working group on International Relations of Conseil d'Orientation Scientifique et Technique (COST)
Delphine Ropers	Inria	Member of Commission d'évaluation d'Inria
Delphine Ropers	Inria Grenoble - Rhône-Alpes	Référente chercheurs
Delphine Ropers	Inria Grenoble - Rhône-Alpes	Member of Comité des études doctorales (CED)