Section: Dissemination

Teaching - Supervision - Juries

Teaching

• Licence : C. Lemaitre, Statistics for biology, 30h, L3, Univ. Rennes 1, France.

• Licence : R. Andonov, S. Francois, Graph Algorithms, 80h, L3, Univ. Rennes 1, France.

• Licence : L. Lecompte, Systems, 16h, L3, Univ. Rennes 1, France.

• Licence : S. Francois, Programming, 22h, L3 Miage, Univ. Rennes 1, France.

• Master : R. Andonov, S. Francois, Operational research, 82h, M1 Miage, Univ. Rennes 1, France.

• Master : L. Lecompte, Python for ecologists, 21h, M1, Univ. Rennes 1, France.

• Master : C. Lemaitre, P. Peterlongo, Algorithms on Sequences, 52h, M2, Univ. Rennes 1, France.

• Master : L. Lecompte, C. Lemaitre, P. Peterlongo, Algorithms on Sequences for Bioinformatics, 50h, M1, Univ. Rennes 1, France.

• Master : C. Lemaitre, P. Peterlongo, Experimental Bioinformactics, 24h, M1, ENS Rennes, France.

• Master : C. Guyomar, Statistical learnings, 30h, M2, Univ. Rennes, France.

• Master : F. Legeai, RNA-Seq, Metagenomics and Variant discovery, 12h, M2, AgroCampusOuest, National Superior School Of Agronomy, Rennes, France.

• Master : R. Andonov, Advanced Algorithmics, 25h, Univ. Rennes 1, France.

• Training : P. Durand, G. Rizk, GATB Programming Day, 16h (April 26-27), Grenada, Spain.

• Training : P. Durand, G. Rizk, GATB Programming Day, 8h (June 6), Montpellier, France.

• Training : G. Rizk, GATB Programming Day, 8h (October 24), Rennes, France.

Supervision

• PhD : G. Benoit, Large scale de novo comparative metagenomics, Univ Rennes, 29/11/2017, D. Lavenier and C. Lemaitre. [11]

• PhD : A. Limasset, Nouvelles approches pour l'exploitation des données de séquençage haut débit, Univ Rennes, 12/07/2017, D. Lavenier and P. Peterlongo. [12]

• PhD : P. Hoan Son, Novel Pattern Mining Techniques for Genome-wide Association Studies, 22/12/2017, D. Lavenier and A. Termier.

• PhD in progress : C. Guyomar, Bioinformatic tools and applications for metagenomics of bacterial communities associated to insects, 01/10/2015, J.C. Simon, C. Mougel, C. Lemaitre and F. Legeai.

• PhD in progress : C. Marchet, Nouvelles méthodologies pour l’assemblage de données de séquençage polymorphes, 01/10/2015, P. Peterlongo.

• PhD in progress : S. François, Combinatorial Optimization Approaches for Bioinformatics, 01/10/2016, R. Andonov.

• PhD in progress : L. Lecompte, Structural Variant detection in long-read sequencing data, 01/09/2017, D. Lavenier and C. Lemaitre.

• PhD in progress : W. Delage, Assemblage de novo local pour la détection de variations complexes pour le diagnostic des maladies rares, 01/10/2017, J. Thévenon and C. Lemaitre.

Juries

• Member of Ph-D thesis juries. Arnaud Meng, University Pierre et Marie Curie [C. Lemaitre], Damien Courtine, University of Brest [D. Lavenier].

• Referee of Ph-D thesis. Pierre Pericard, University of Lille [D. Lavenier], Louise-Amelie Schmitt, Bordeaux University [P. Peterlongo], Kamil Salikov, University Paris Est [P. Peterlongo]

• Member of Ph-D thesis comitees. L. Ishi Soares de Lima, University of Lyon [C. Lemaitre], Cervin Guyomar, University of Rennes [P. Peterlongo], Pierre Marijon, University of Lille [P. Peterlongo], Pierre Charrier, Oniris Nantes [P. Peterlongo], Victor Gaborit, Inserm Nantes [P. Peterlongo], Guillaume Gautreau, University Paris Saclay [P. Peterlongo].

• President of a jury for the recuitment of a INRA bioinformatics engineer [Fabrice Legeai].