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Doctoral Dissertations and Habilitation Theses

• 11T. Dreyfus.
  
  Assessing the Reconstruction of Macro-molecular Assemblies: the Example of the Nuclear Pore Complex, Informatique, Université de Nice Sophia Antipolis, 2011.

Articles in International Peer-Reviewed Journal

• 12R. Andonov, N. Malod-Dognin, N. Yanev.
  
  Maximum Contact Map Overlap Revisited, in: Journal of Computational Biology, January 2011, vol. 18, n^o 1, p. 1-15. [ DOI : 10.1089/cmb.2009.0196 ]
  
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  On the Characterization and Selection of Diverse Conformational Ensembles, in: IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2011, vol. 8, n^o 2, p. 487–498.

International Conferences with Proceedings

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  Shape Matching by Localized Calculations of Quasi-isometric Subsets, with Applications to the Comparison of Protein Binding Patches, in: The 6th IAPR International Conference on Pattern Recognition in Bioinformatics (PRIB), Delft, Netherlands, Loog, Marco, Wessels, Lodewyk, Reinders, Marcel, d. Ridder, Dick (editors), Lecture Notes in Computer Science, Springer Berlin / Heidelberg, June 2011, vol. 7036, p. 272-283.
  
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  Using Dominances for Solving the Protein Family Identification Problem, in: 11th Workshop on Algorithms in Bioinformatics (WABI 2011), Saarbrücken, Germany, Przytycka, Teresa, Sagot, Marie-France (editors), Lecture Notes in Computer Science, Springer Berlin / Heidelberg, July 2011, vol. 6833, p. 201-212, Published in Workshop on Algorithms for Bioinformatics (WABI 2011) http://predictioncenter.org . [ DOI : 10.1007/978-3-642-23038-7_18 ]
  
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National Conferences with Proceeding

• 18M. L. Boudic-Jamin, N. Malod-Dognin, A. Cornu, J. Nicolas, R. Andonov.
  
  Identification rapide de familles protéiques par dominance, in: 12th Annual Congress of the French National Society of Operations Research and Decision Science (ROADEF), Saint-Étienne, France, École Nationale Supérieure des Mines de Saint-Étienne, March 2011, vol. 2, p. 791-792, Publié dans le douzième congrès de la Société Française de Recherche Opérationnelle et d'Aide à la Décision (ROADEF 2011)..
  
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  Assessing the Reconstruction of Macro-molecular Assemblies: the Example of the Nuclear Pore Complex, INRIA, January 2011, n^o RR-7513.
  
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  Assessing the Reconstruction of Macro-molecular Assemblies with Toleranced Models, INRIA, 2011, n^o RR-7768.
  
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  Characterizing the Morphology of Protein Binding Patches, INRIA, September 2011, n^o RR-7743.
  
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