Bibliography

Major publications by the team in recent years

1L. Boudin, L. Desvillettes, R. Motte.

A modeling of compressible droplets in a fluid, in: Commun. Math. Sci., 2003, vol. 1, n^o 4, p. 657–669.
2M. Boulakia, S. Guerrero.

Regular solutions of a problem coupling a compressible fluid and an elastic structure, in: Journal de Mathématiques Pures et Appliquées, 2010, vol. 94, n^o 4, p. 341-365. [ DOI : 10.1016/j.matpur.2010.04.002 ]

http://hal.inria.fr/hal-00648710/en/
3E. Burman, M. A. Fernández Varela.

Galerkin Finite Element Methods with Symmetric Pressure Stabilization for the Transient Stokes Equations: Stability and Convergence Analysis, in: SIAM Journal on Numerical Analysis, 2008, vol. 47, n^o 1, p. 409–439.
4E. Burman, M. A. Fernández Varela.

Stabilization of explicit coupling in fluid-structure interaction involving fluid incompressibility, in: Comput. Methods Appl. Mech. Engrg., 2008.
5P. Causin, J.-F. Gerbeau, F. Nobile.

Added-mass effect in the design of partitioned algorithms for fluid-structure problems, in: Comp. Meth. Appl. Mech. Engng., 2005, vol. 194, n^o 42-44.
6M. A. Fernández Varela, J.-F. Gerbeau, C. Grandmont.

A projection semi-implicit scheme for the coupling of an elastic structure with an incompressible fluid, in: Internat. J. Numer. Methods Engrg., 2007, vol. 69, n^o 4, p. 794–821.
7C. Fetita, S. Mancini, D. Perchet, F. Prêteux, M. Thiriet, L. Vial.

Computational model of oscillatory flow in the proximal part of tracheobronchial trees, in: Computer Methods in Biomechanics and Biomedical Engineering, 2005, vol. 8, p. 279-293.
8C. Grandmont.

Existence of weak solutions for the unsteady interaction of a viscous fluid with an elastic plate, in: SIAM J. Math. Anal., 2008, vol. 40, n^o 2, p. 716–737.
9A. Moussa, T. Goudon, L. He, P. Zhang.

The Navier-Stokes-Vlasov-Fokker-Planck system near equilibrium, in: SIAM Journal on Mathematical Analysis, September 2010.

http://hal.inria.fr/hal-00652341/en
10M. Thiriet.

Biology and Mechanics of Blood Flows, part I: Biology of Blood Flows (652 p.), part II: Mechanics and Medical Aspects of Blood Flows (464 p.), CRM Series in Mathematical Physics, Springer, 2008.
11I. Vignon-Clementel, C. Figueroa, K. E. Jansen, C. A. Taylor.

Outflow Boundary Conditions for Three-dimensional Finite Element Modeling of Blood Flow and Pressure in Arteries, in: Computer Methods in Applied Mechanics and Engineering, 2006, vol. 195, p. 3776-3796.

Publications of the year

Doctoral Dissertations and Habilitation Theses

12L. Boudin.

Modélisation cinétique et hydrodynamique pour la physique, la chimie et la santé, analyse mathématique et numérique, Université Pierre et Marie Curie - Paris VI, December 2011, Habilitation à Diriger des Recherches.

http://hal.inria.fr/tel-00650560/en

Articles in International Peer-Reviewed Journal

13A. Baretta, C. Corsini, W. Yang, I. Vignon-Clementel, A. Marsden, J. Feinstein, T.-Y. Hsia, G. Dubini, F. Migliavacca, G. Pennati, Modeling of Congenital Hearts Alliance Investigators, Mocha.

Virtual surgeries in patients with congenital heart disease: a multi-scale modelling test case., in: Philosophical Transactions A: Mathematical, Physical and Engineering Sciences, November 2011, vol. 369, n^o 1954, p. 4316-30. [ DOI : 10.1098/rsta.2011.0130 ]

http://hal.inria.fr/hal-00650838/en
14L. Boudin, J. Mathiaud.

A numerical scheme for the one-dimensional pressureless gases system, in: Numerical Methods for Partial Differential Equations, August 2011. [ DOI : 10.1002/num.20700 ]

http://hal.inria.fr/hal-00537145/en
15E. Burman, M. A. Fernández Varela.

Analysis of the PSPG method for the transient Stokes' problem, in: Computer Methods in Applied Mechanics and Engineering, 2011, vol. 200, n^o 41-44, p. 2882-2890. [ DOI : 10.1016/j.cma.2011.05.001 ]

http://hal.inria.fr/inria-00426777/en
16A. Caiazzo, M. A. Fernández Varela, J.-F. Gerbeau, V. Martin.

Projection schemes for fluid flows through a porous interface, in: SIAM Journal on Scientific Computing, 2011, vol. 33, n^o 2, p. 541-564. [ DOI : 10.1137/100788124 ]

http://hal.inria.fr/inria-00462103/en
17A. Caiazzo, M. A. Fernández Varela, V. Martin.

Analysis of a stabilized finite element method for fluid flows through a porous interface, in: Applied Mathematics Letters, June 2011, vol. 24, n^o 12, p. 2124-2127. [ DOI : 10.1016/j.aml.2011.06.012 ]

http://hal.inria.fr/inria-00543014/en
18M. Esmaily Moghadam, Y. Bazilevs, T.-Y. Hsia, I. Vignon-Clementel, A. Marsden, Modeling of Congenital Hearts Alliance Investigators, Mocha.

A comparison of outlet boundary treatments for prevention of backflow divergence with relevance to blood flow simulations, in: Computational Mechanics, September 2011, vol. 48, n^o 3, p. 277-291. [ DOI : 10.1007/s00466-011-0599-0 ]

http://hal.inria.fr/hal-00650986/en
19M. A. Fernández Varela.

Coupling schemes for incompressible fluid-structure interaction: implicit, semi-implicit and explicit, in: SeMa Journal, June 2011, n^o 55, p. 59-108.

http://hal.inria.fr/inria-00580772/en
20M. A. Fernández Varela.

Incremental displacement-correction schemes for the explicit coupling of a thin structure with an incompressible fluid, in: Comptes Rendus Mathematique, March 2011, vol. 349, n^o 7-8, p. 473-477. [ DOI : 10.1016/j.crma.2011.03.001 ]

http://hal.inria.fr/inria-00542917/en
21M. A. Fernández Varela, J. Mullaert.

Displacement-velocity correction schemes for incompressible fluid-structure interaction, in: Comptes Rendus Mathématique, October 2011, vol. 349, n^o 17-18, p. 1011-1015. [ DOI : 10.1016/j.crma.2011.08.004 ]

http://hal.inria.fr/inria-00583126/en
22J. F. Ladisa, R. J. Dholakia, C. Figueroa, I. Vignon-Clementel, F. P. Chan, M. M. Samyn, J. R. Cava, C. A. Taylor, J. Feinstein.

Computational simulations demonstrate altered wall shear stress in aortic coarctation patients treated by resection with end-to-end anastomosis., in: Congenital Heart Disease, September 2011, vol. 6, n^o 5, p. 432-43. [ DOI : 10.1111/j.1747-0803.2011.00553.x ]

http://hal.inria.fr/hal-00651958/en
23J. F. Ladisa, C. Figueroa, I. Vignon-Clementel, H. J. Kim, N. Xiao, L. M. Ellwein, F. P. Chan, J. Feinstein, C. A. Taylor.

Computational simulations for aortic coarctation: representative results from a sampling of patients., in: Journal of Biomechanical Engineering, September 2011, vol. 133, n^o 9. [ DOI : 10.1115/1.4004996 ]

http://hal.inria.fr/hal-00651929/en
24P. Moireau, N. Xiao, M. Astorino, C. Figueroa, D. Chapelle, C. A. Taylor, J.-F. Gerbeau.

External tissue support and fluid-structure simulation in blood flows, in: Biomechanics and Modeling in Mechanobiology, 2011. [ DOI : 10.1007/s10237-011-0289-z ]

http://hal.inria.fr/hal-00653231/en
25A. Moussa, J. A. Carrillo, R. Duan.

Global classical solutions close to equilibrium to the Vlasov-Fokker-Planck-Euler system, in: Kinetic and related models, March 2011.

http://hal.inria.fr/hal-00652339/en
26R. Raghu, I. Vignon-Clementel, C. Figueroa, C. A. Taylor.

Comparative study of viscoelastic arterial wall models in nonlinear one-dimensional finite element simulations of blood flow., in: Journal of Biomechanical Engineering, August 2011, vol. 133, n^o 8. [ DOI : 10.1115/1.4004532 ]

http://hal.inria.fr/hal-00650846/en
27Z. Sheng, M. Thiriet, F. Hecht.

An efficient numerical method for the equations of steady and unsteady flows of homogeneous incompressible Newtonian fluid., in: Journal of Computational Physics, 2011, vol. 230, n^o 3, p. 551-571.

http://hal.inria.fr/inria-00543063/en
28T. Sheu, M. Solovchuk, A. Chen, M. Thiriet.

On an acoustics-thermal-fluid coupling model for the prediction of temperature elevation in liver tumor, in: International Journal of Heat and Mass Transfer, 2011, vol. 54, p. 4117–4126.

http://hal.inria.fr/hal-00651161/en
29G. Troianowski, C. A. Taylor, J. Feinstein, I. Vignon-Clementel.

Three-dimensional simulations in Glenn patients: clinically based boundary conditions, hemodynamic results and sensitivity to input data, in: Journal of Biomechanical Engineering, November 2011, vol. 133, n^o 11. [ DOI : 10.1115/1.4005377 ]

http://hal.inria.fr/hal-00651023/en
30K. Wang, A. Rallu, J.-F. Gerbeau, C. Farhat.

Algorithms for Interface Treatment and Load Computation in Embedded Boundary Methods for Fluid and Fluid-Structure Interaction Problems, in: International Journal for Numerical Methods in Fluids, 2011, vol. 67, n^o 9, p. 1175-1206. [ DOI : 10.1002/fld.2556 ]

http://hal.inria.fr/hal-00651118/en
31W. Yang, I. Vignon-Clementel, G. Troianowski, V. M. Reddy, J. Feinstein, A. Marsden.

Hepatic blood flow distribution and performance in conventional and novel Y-graft Fontan geometries: A case series computational fluid dynamics study., in: Journal of Thoracic and Cardiovascular Surgery, September 2011, epub ahead of print - Official Publication of The American Association for Thoracic Surgery and The Western Thoracic Surgical Association. [ DOI : 10.1016/j.jtcvs.2011.06.042 ]

http://hal.inria.fr/hal-00649953/en

International Conferences with Proceedings

32M. Boulakia, J.-F. Gerbeau.

Parameter identification in cardiac electrophysiology using Proper Orthogonal Decomposition method, in: FIMH2011 : Sixth International Conference on Functional Imaging and Modeling of the Heart, New York, États-Unis, D. Metaxas, L. Axel (editors), Lecture Notes in Computer Science, Springer-Verlag, 2011, vol. 6666, p. 315-322. [ DOI : 10.1007/978-3-642-21028-0_40 ]

http://hal.inria.fr/hal-00650606/en
33P. Garda, J. Mazeyrat, O. Romain, H. Talleb, D. Lautru, M.-F. Wong, J. Wiart, V. Fouad Hanna, P.-Y. Lagrée, M. Bonneau, C. Kang, M. A. Fernández Varela, J.-F. Gerbeau, V. Deplano, C. Legallais, P. Leprince.

RFID implantable pressure sensor for the follow-up of abdominal aortic aneurysm stended, in: IEEE DTIS 2011 : 6th International conference on Design & Technology of Integrated Systems in nanoscale era, Athens, Grèce, IEEE, June 2011, on CD-ROM.

http://hal.inria.fr/hal-00600948/en
34V. Martin, A. Drochon, O. Fokapu, J.-F. Gerbeau.

MagnetoHemoDynamics Effect on Electrocardiograms, in: Functional Imaging and Modeling of the Heart, New-York, États-Unis, D. Metaxas, L. Axel (editors), Lecture Notes in Computer Science, Springer, 2011, vol. 6666, p. 325-332.

http://hal.inria.fr/hal-00652042/en
35O. Romain, J. Mazeyrat, P. Garda, H. Talleb, D. Lautru, M.-F. Wong, J. Wiart, V. Fouad Hanna, P.-Y. Lagrée, M. Bonneau, C. Kang, M. A. Fernández Varela, J.-F. Gerbeau, V. Deplano, C. Legallais, P. Leprince.

ENDOCOM: Implantable wireless pressure sensor for the follow-up of abdominal aortic aneurysm stented, in: RITS 2011 - Recherche en Imagerie et Technologies pour la Santé, Rennes, France, Elsevier, June 2011, vol. 32, p. 163-168, 6 pages. [ DOI : 10.1016/j.irbm.2011.01.017 ]

http://hal.inria.fr/hal-00610462/en

National Conferences with Proceeding

36M. A. Fernández Varela, J. Mullaert, Y. Maday.

Préconditionnement d algorithmes d interaction fluide-structure, in: 10e colloque national en calcul des structures, Giens, France, 2011, Clé USB p.

http://hal.inria.fr/hal-00592797/en
37I. Vignon-Clementel, D. Chapelle, J. Sainte-Marie, J.-F. Gerbeau.

A poroelastic model valid in large strains with applications to perfusion in cardiac modeling, in: 10e colloque national en calcul des structures, Giens, France, 2011, 2 p.

http://hal.inria.fr/hal-00592688/en

Scientific Books (or Scientific Book chapters)

38M. Boulakia, M. A. Fernández Varela, J.-F. Gerbeau, N. Zemzemi.

Numerical simulations of electrocardiograms, in: Modeling of Physiological Flows, D. Ambrosi, A. Quarteroni, G. Rozza (editors), Springer, 2011, p. 77-106.

http://hal.inria.fr/hal-00652367/en
39J.-F. Gerbeau.

Simulation numérique de phénomènes couplés: l'exemple de l'interaction fluide-solide, in: Le climat à découvert, C. Jeandel, R. Mosseri (editors), CNRS Editions, 2011.

http://hal.inria.fr/hal-00653195/en
40M. Thiriet.

Cell and Tissue Organization in the Circulatory and Ventilatory Systems, Biomathematical and Biomechanical Modeling of the Circulatory and Ventilatory Systems, Springer, 2011, vol. 1.

http://hal.inria.fr/hal-00651146/en
41M. Thiriet.

Control of Cell Fate in the Circulatory and Ventilatory Systems, Biomathematical and Biomechanical Modeling of the Circulatory and Ventilatory Systems, Springer, 2011, vol. 2.

http://hal.inria.fr/hal-00651147/en

Internal Reports

42C. Bertoglio, P. Moireau, J.-F. Gerbeau.

Sequential parameter estimation for fluid-structure problems. Application to hemodynamics, INRIA, June 2011, n^o RR-7657.

http://hal.inria.fr/inria-00603399/en
43L. Boudin, A. Mercier, F. Salvarani.

Conciliatory and contradictory dynamics in opinion formation, UPMC, August 2011.

http://hal.inria.fr/hal-00613119/en
44M. Boulakia, S. Guerrero.

Local null controllability of a fluid-solid interaction problem in dimension 3, UPMC, 2011.

http://hal.inria.fr/hal-00650122/en
45M. Boulakia, E. Schenone, J.-F. Gerbeau.

Reduced-order modeling for cardiac electrophysiology. Application to parameter identification, INRIA, November 2011, n^o RR-7811.

http://hal.inria.fr/hal-00644396/en
46M. A. Fernández Varela.

Incremental displacement-correction schemes for incompressible fluid-structure interaction: stability and convergence analysis, INRIA, July 2011, n^o RR-7671.

http://hal.inria.fr/inria-00605890/en
47N. Frih, V. Martin, J. Roberts, A. Saada.

Modeling fractures as interfaces with nonmatching grids, INRIA, February 2011, n^o RR-7517.

http://hal.inria.fr/inria-00561601/en
48V. Martin, A. Drochon, O. Fokapu, J.-F. Gerbeau.

MagnetoHemoDynamics in Aorta and Electrocardiograms, INRIA, September 2011, n^o RR-7747.

http://hal.inria.fr/inria-00628032/en

Other Publications

49L. Boudin, B. Grec, F. Salvarani.

The Maxwell-Stefan diffusion limit for a kinetic model of mixtures, 2011, submitted for publication.

http://hal.inria.fr/hal-00554744/en
50M. Boulakia, A.-C. Egloffe, C. Grandmont.

Logarithmic stability estimates for a Robin coefficient in two dimensional Stokes problem, 2011, submitted for publication.

http://hal.inria.fr/hal-00582559/en

References in notes

51A. Amsden, P. O'Rourke, T. Butler.

A computer program for chemically reactive flows with sprays, Los Alamos National Laboratory, 1989, n^o LA-11560-MS.
52M. A. Biot.

Theory of propagation of elastic waves in a fluid-saturated porous solid. II higher frequency range, in: J. Acoust. Soc. Am., 1956, vol. 28, p. 179–191.
53D. Chapelle, J. Sainte-Marie, J.-F. Gerbeau, I. Vignon-Clementel.

A poroelastic model valid in large strains with applications to perfusion in cardiac modeling, in: Computational Mechanics, 2010, vol. 46, n^o 1, p. 91-101. [ DOI : 10.1007/s00466-009-0452-x ]

http://hal.inria.fr/inria-00542672/en
54J. Dupays, Y. Fabignon, P. Villedieu, G. Lavergne, G. Estivalezes.

Some aspects of two phase flows in solid propellant rocket motors, in Solid propellant chemistry, combustion and interior ballistics, in: Progress in Astronautics and Aeronautics, V. Yang, T. Brill, W. Pen (editors), Academic Press, 2000, vol. 185.
55G. Lines, P. Grottum, A. Tveito.

Modeling the electrical activity of the heart. A bidomain model of the ventricles embedded in a torso., in: Comput. Visual. Sci., 2003, vol. 5, p. 195-213.
56R. Motte.

A numerical method for solving particle-fluid equations, in: Trends in numerical and physical modeling for industrial multiphase flows, Cargèse, France, 2000.
57A. Quarteroni, S. Ragni, A. Veneziani.

Coupling between lumped and distributed models for blood flow problems, in: Comput. Visual Sci., 2001, vol. 4, p. 111–124.
58F. Sachse.

Computational Cardiology: Modeling of Anatomy, Electrophysiology, and Mechanics, Springer-Verlag, 2004.
59J. Sundnes, G. Lines, X. Cai, B. Nielsen, K.-A. Mardal, A. Tveito.

Computing the electrical activity in the heart, Springer-Verlag, 2006.
60K. Terzaghi.

Theoretical Soil Mechanics, John Wiley and Sons, New-York, 1943.
61F. Williams.

Combustion theory, 2nd, Benjamin Cummings, 1985.

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