Bibliography
Major publications by the team in recent years
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1L. Boudin, L. Desvillettes, R. Motte.
A modeling of compressible droplets in a fluid, in: Commun. Math. Sci., 2003, vol. 1, no 4, p. 657–669. -
2M. Boulakia, S. Guerrero.
Regular solutions of a problem coupling a compressible fluid and an elastic structure, in: Journal de Mathématiques Pures et Appliquées, 2010, vol. 94, no 4, p. 341-365. [ DOI : 10.1016/j.matpur.2010.04.002 ]
http://hal. inria. fr/ hal-00648710/ en/ -
3E. Burman, M. A. Fernández Varela.
Galerkin Finite Element Methods with Symmetric Pressure Stabilization for the Transient Stokes Equations: Stability and Convergence Analysis, in: SIAM Journal on Numerical Analysis, 2008, vol. 47, no 1, p. 409–439. -
4E. Burman, M. A. Fernández Varela.
Stabilization of explicit coupling in fluid-structure interaction involving fluid incompressibility, in: Comput. Methods Appl. Mech. Engrg., 2008. -
5P. Causin, J.-F. Gerbeau, F. Nobile.
Added-mass effect in the design of partitioned algorithms for fluid-structure problems, in: Comp. Meth. Appl. Mech. Engng., 2005, vol. 194, no 42-44. -
6J.-J. Christophe, T. Ishikawa, N. Matsuki, Y. Imai, K. Takase, M. Thiriet, T. Yamaguchi.
Patient-specific morphological and blood flow analysis of pulmonary artery in the case of severe deformations of the lung due to pneumothorax, in: Journal of Biomechanical Science and Engineering, 2010, vol. 5, no 5, p. 485-498.
http://hal. inria. fr/ inria-00543090 -
7M. A. Fernández Varela, J.-F. Gerbeau, C. Grandmont.
A projection semi-implicit scheme for the coupling of an elastic structure with an incompressible fluid, in: Internat. J. Numer. Methods Engrg., 2007, vol. 69, no 4, p. 794–821. -
8C. Fetita, S. Mancini, D. Perchet, F. Prêteux, M. Thiriet, L. Vial.
Computational model of oscillatory flow in the proximal part of tracheobronchial trees, in: Computer Methods in Biomechanics and Biomedical Engineering, 2005, vol. 8, p. 279-293. -
9C. Grandmont.
Existence of weak solutions for the unsteady interaction of a viscous fluid with an elastic plate, in: SIAM J. Math. Anal., 2008, vol. 40, no 2, p. 716–737. -
10A. Moussa, T. Goudon, L. He, P. Zhang.
The Navier-Stokes-Vlasov-Fokker-Planck system near equilibrium, in: SIAM Journal on Mathematical Analysis, September 2010.
http://hal. inria. fr/ hal-00652341/ en -
11M. Thiriet.
Biology and Mechanics of Blood Flows, part I: Biology of Blood Flows (652 p.), part II: Mechanics and Medical Aspects of Blood Flows (464 p.), CRM Series in Mathematical Physics, Springer, 2008. -
12I. Vignon-Clementel, C. A. Figueroa, K. E. Jansen, C. A. Taylor.
Outflow Boundary Conditions for Three-dimensional Finite Element Modeling of Blood Flow and Pressure in Arteries, in: Computer Methods in Applied Mechanics and Engineering, 2006, vol. 195, p. 3776-3796.
Doctoral Dissertations and Habilitation Theses
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13C. Bertoglio.
Problèmes Directs et Inverses en Interaction Fluide-Structure. Application à l'hémodynamique, Université Pierre et Marie Curie - Paris VI, November 2012.
http://hal. inria. fr/ tel-00768188 -
14P. Cazeaux.
Quelques modèles mathématiques homogénéisés appliqués à la modélisation du parenchyme pulmonaire, Université Pierre et Marie Curie - Paris VI, December 2012.
http://hal. inria. fr/ tel-00765331 -
15A.-C. Egloffe.
Etude de quelques problèmes inverses pour le système de Stokes. Application aux poumons., Université Pierre et Marie Curie - Paris VI, November 2012.
http://hal. inria. fr/ tel-00756334 -
16S. Hendili.
Structures élastiques comportant une fine couche d'hétérogénéités : étude asymptotique et numérique., Université Montpellier II - Sciences et Techniques du Languedoc, July 2012, Thèse financée par le projet ANR Epsilon et réalisée dans le cadre d'une collaboration entre l'université Montpellier 2 et l'Inria Rocquencourt..
http://tel. archives-ouvertes. fr/ tel-00765018 -
17S. Martin.
Modélisation et analyse mathématique de problèmes issus de la mécanique des fluides : applications à la tribologie et aux sciences du vivant, Université Paris Sud - Paris XI, December 2012, HDR.
http://tel. archives-ouvertes. fr/ tel-00765580
Articles in International Peer-Reviewed Journals
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18M. Astorino, J. Hamers, S. Shadden, J.-F. Gerbeau.
A robust and efficient valve model based on resistive immersed surfaces, in: International Journal for Numerical Methods in Biomedical Engineering, 2012, vol. 28, no 9, p. 937-959. [ DOI : 10.1002/cnm.2474 ]
http://hal. inria. fr/ hal-00717213 -
19A. Baretta, C. Corsini, A. Marsden, I. Vignon-Clementel, T.-Y. Hsia, G. Dubini, F. Migliavacca, G. Pennati, F. The Modeling Of Congenital Hearts Alliance (mocha) Investigators.
Respiratory effects on hemodynamics in patient-specific CFD models of the Fontan circulation under exercise conditions, in: European Journal of Mechanics B-Fluids, 2012, vol. 35, p. 61-69. [ DOI : 10.1016/j.euromechflu.2012.01.012 ]
http://hal. inria. fr/ hal-00765808 -
20C. Bertoglio, P. Moireau, J.-F. Gerbeau.
Sequential parameter estimation for fluid-structure problems. Application to hemodynamics, in: International Journal for Numerical Methods in Biomedical Engineering, April 2012, vol. 28, no 4, p. 434-455. [ DOI : 10.1002/cnm.1476 ]
http://hal. inria. fr/ inria-00603399 -
21L. Boudin, B. Grec, M. Pavic, F. Salvarani.
Diffusion asymptotics of a kinetic model for gaseous mixtures, in: Kinetic and related models, March 2013, vol. 6, no 1, p. 137-157. [ DOI : 10.3934/krm.2013.6.137 ]
http://hal. inria. fr/ hal-00704952 -
22L. Boudin, B. Grec, F. Salvarani.
A mathematical and numerical analysis of the Maxwell-Stefan diffusion equations, in: Discrete and Continuous Dynamical Systems - Series B, 2012, vol. 17, no 5, p. 1427-1440. [ DOI : 10.3934/dcdsb.2012.17.1427 ]
http://hal. inria. fr/ hal-00490511 -
23L. Boudin, J. Mathiaud.
A numerical scheme for the one-dimensional pressureless gases system, in: Numerical Methods for Partial Differential Equations, September 2012, vol. 28, no 6, p. 1729-1746. [ DOI : 10.1002/num.20700 ]
http://hal. inria. fr/ hal-00537145 -
24L. Boudin, A. Mercier, F. Salvarani.
Conciliatory and contradictory dynamics in opinion formation, in: Physica A: Statistical Mechanics and its Applications, 2012, vol. 391, p. 5672-5684. [ DOI : 10.1016/j.physa.2012.05.070 ]
http://hal. inria. fr/ hal-00613119 -
25M. Boulakia, E. Schenone, J.-F. Gerbeau.
Reduced-order modeling for cardiac electrophysiology. Application to parameter identification, in: International Journal for Numerical Methods in Biomedical Engineering, 2012, vol. 28, p. 727-744. [ DOI : 10.1002/cnm.2465 ]
http://hal. inria. fr/ hal-00644396 -
26M. Boulakia, E. Schwindt, T. Takahashi.
Existence of strong solutions for the motion of an elastic structure in an incompressible viscous fluid, in: Interfaces and Free Boundaries, 2012, vol. 14, no 3, p. 273-306. [ DOI : 10.4171/IFB/282 ]
http://hal. inria. fr/ hal-00765176 -
27J.-J. Christophe, T. Ishikawa, Y. Imai, K. Takase, M. Thiriet, T. Yamaguchi.
Hemodynamics in the pulmonary artery of a patient with pneumothorax, in: Medical Engineering and Physics, 2012, vol. 34, no 6, p. 725-732. [ DOI : 10.1016/j.medengphy.2011.09.016 ]
http://hal. inria. fr/ hal-00715123 -
28C. Corrado.
On the Stability of the Immersed finite element Method with High Order structural Elements, in: Computers & Structures, October 2012, vol. 112-113, p. 422-432. [ DOI : 10.1016/j.compstruc.2012.09.008 ]
http://hal. inria. fr/ hal-00764564 -
29M. Esmaily Moghadam, F. Migliavacca, I. Vignon-Clementel, T.-Y. Hsia, A. Marsden, The Modeling Of Congenital Hearts Alliance (mocha) Investigators, For.
Optimization of shunt placement for the Norwood surgery using multi-domain modeling., in: Journal of Biomechanical Engineering, May 2012, vol. 134, no 5, 051002 p. [ DOI : 10.1115/1.4006814 ]
http://hal. inria. fr/ hal-00765729 -
30M. Esmaily Moghadam, I. Vignon-Clementel, R. Figliola, A. Marsden, F. The Modeling Of Congenital Hearts Alliance (mocha) Investigators.
A modular numerical method for implicit 0D/3D coupling in cardiovascular finite element simulations, in: Journal of Computational Physics, 2012. [ DOI : 10.1016/j.jcp.2012.07.035 ]
http://hal. inria. fr/ hal-00765816 -
31C. Farhat, J.-F. Gerbeau, A. Rallu.
FIVER: A Finite Volume Method Based on Exact Two-Phase Riemann Problems and Sparse Grids for Multi-Material Flows with Large Density Jumps, in: Journal of Computational Physics, 2012, vol. 231, p. 6360-6379. [ DOI : 10.1016/j.jcp.2012.05.026 ]
http://hal. inria. fr/ hal-00703493 -
32M. A. Fernández Varela.
Incremental displacement-correction schemes for incompressible fluid-structure interaction: stability and convergence analysis, in: Numerische Mathematik, 2012. [ DOI : 10.1007/s00211-012-0481-9 ]
http://hal. inria. fr/ inria-00605890 -
33A. Gloria, P. Le Tallec, M. Vidrascu.
Foundation, analysis, and numerical investigation of a variational network-based model for rubber, in: Continuum Mechanics and Thermodynamics, 2013, p. 1–31. [ DOI : 10.1007/s00161-012-0281-6 ]
http://hal. inria. fr/ hal-00673406 -
34E. Kung, A. Baretta, C. Baker, G. Arbia, G. Biglino, C. Corsini, S. Schievano, I. Vignon-Clementel, G. Dubini, G. Pennati, A. Taylor, A. Dorfman, A. M. Hlavacek, A. Marsden, T.-Y. Hsia, F. Migliavacca, The Modeling Of Congenital Hearts Alliance (mocha) Investigators, For.
Predictive modeling of the virtual Hemi-Fontan operation for second stage single ventricle palliation: Two patient-specific cases., in: Journal of Biomechanics, November 2012. [ DOI : 10.1016/j.jbiomech.2012.10.023 ]
http://hal. inria. fr/ hal-00765797 -
35V. Martin, A. Drochon, O. Fokapu, J.-F. Gerbeau.
MagnetoHemoDynamics in Aorta and Electrocardiograms, in: Physics in Medicine and Biology, 2012, vol. 57, no 10, p. 3177-3195, Preprint of Vincent Martin et al 2012 Phys. Med. Biol. 57 3177 doi:10.1088/0031-9155/57/10/3177. [ DOI : 10.1088/0031-9155/57/10/3177 ]
http://hal. inria. fr/ inria-00628032 -
36A. Maxim, W. Tony, L. Win-Li, I. Kuo, M. Thiriet.
Simulation study on acoustic streaming and convective cooling in blood vessels during a high-intensity focused ultrasound thermal ablation, in: International Journal of Heat and Mass Transfer, 2012, vol. 55, no 4, p. 1261 - 1270, 4 4. [ DOI : 10.1016/j.ijheatmasstransfer.2011.09.023 ]
http://hal. inria. fr/ hal-00715205 -
37P. Moireau, C. Bertoglio, N. Xiao, C. A. Figueroa, C. A. Taylor, D. Chapelle, J.-F. Gerbeau.
Sequential identification of boundary support parameters in a fluid-structure vascular model using patient image data, in: Biomechanics and Modeling in Mechanobiology, July 2012. [ DOI : 10.1007/s10237-012-0418-3 ]
http://hal. inria. fr/ hal-00760703 -
38P. Moireau, N. Xiao, M. Astorino, C. A. Figueroa, D. Chapelle, C. A. Taylor, J.-F. Gerbeau.
External tissue support and fluid-structure simulation in blood flows, in: Biomechanics and Modeling in Mechanobiology, 2012, vol. 11, no 1-2, p. 1-18. [ DOI : 10.1007/s10237-011-0289-z ]
http://hal. inria. fr/ hal-00701801 -
39M. Tang, N. Vauchelet, I. Cheddadi, I. Vignon-Clementel, D. Drasdo, B. Perthame.
Composite waves for a cell population system modelling tumor growth and invasion, in: Chinese Annals of Mathematics - Series B, 2013, vol. 34B, no 2, p. 295-318. [ DOI : 10.1007/s11401-007-0001-x ]
http://hal. inria. fr/ hal-00685063 -
40D. Trimarchi, M. Vidrascu, D. Taunton, S. Turnock, D. Chapelle.
Wrinkle development analysis in thin sail-like structures using MITC shell finite elements, in: Finite Elements in Analysis and Design, 2013, vol. 64, p. 48-64. [ DOI : 10.1016/j.finel.2012.09.005 ]
http://hal. inria. fr/ hal-00733994 -
41W. Yang, J. Feinstein, S. Shadden, I. Vignon-Clementel, A. Marsden.
Optimization of a Y-graft design for improved hepatic flow distribution in the Fontan circulation., in: Journal of Biomechanical Engineering, 2012. [ DOI : 10.1115/1.4023089 ]
http://hal. inria. fr/ hal-00765804 -
42W. Yang, I. Vignon-Clementel, G. Troianowski, V. M. Reddy, J. Feinstein, A. Marsden.
Hepatic blood flow distribution and performance in conventional and novel Y-graft Fontan geometries: A case series computational fluid dynamics study., in: Journal of Thoracic and Cardiovascular Surgery, May 2012, vol. 143, no 5, p. 1086-1097, Official Publication of The American Association for Thoracic Surgery and The Western Thoracic Surgical Association. [ DOI : 10.1016/j.jtcvs.2011.06.042 ]
http://hal. inria. fr/ hal-00649953
International Conferences with Proceedings
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43J. Oakes, A. Marsden, C. Grandmont, C. Darquenne, I. Vignon-Clementel.
Multiscale Model of Airflow in Healthy and Emphysema Rat Lungs, in: ASME 2012 Summer Bioengineering Conference, Fajardo, Porto Rico, ASME, June 2012, p. SBC2012-80418.
http://hal. inria. fr/ hal-00768268 -
44M. Solovchuk, T. Sheu, M. Thiriet.
Effects of acoustic nonlinearity and blood flow cooling during HIFU treatment, in: ISTU 2012 - 12th International Symposium on Therapeutic Ultrasound, Heidelberg, Allemagne, S. Meairs (editor), American Institute of Physics, December 2012, p. 83-88. [ DOI : 10.1063/1.4769922 ]
http://hal. inria. fr/ hal-00762555 -
45I. Vignon-Clementel, G. Arbia, A. Baretta, C. Corsini, M. Esmaily Moghadam, G. Troianowski, W. Yang, J. Feinstein, T.-Y. Hsia, A. Marsden, F. Migliavacca, G. Pennati, F. The Modeling Of Congenital Hearts Alliance (mocha) Investigators.
From Patient-Specific Data to Multiscale Hemodynamics Simulations: the Challenge of Boundary Conditions, in: 10th International Symposium on Computer Methods in Biomechanics and Biomedical Engineering, Berlin, Allemagne, J. Middleton (editor), ISBN: 978-0-9562121-5-3, Arup, 2012, p. 603-608.
http://hal. inria. fr/ hal-00765819
Conferences without Proceedings
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46M. A. Fernández Varela, M. Vidrascu.
Incremental displacement-correction schemes for the explicit coupling of an incompressible fluid with a non-linear shell, in: 10th world congress on computational mechanics, Sao-Paulo, Brésil, July 2012.
http://hal. inria. fr/ hal-00740415 -
47M. Vidrascu, G. Geymonat, S. Hendili, F. Krasucki.
Matched asymptotic expansion and domain decomposition for an elastic structure, in: 21st International Conference on Domain Decomposition Methods, Rennes, France, June 2012.
http://hal. inria. fr/ hal-00740383 -
48M. Vidrascu, G. Geymonat, S. Hendili, F. Krasucki.
Une méthode de résolution efficace pour un problème multi-échelle en élasticité, in: XI ème Colloque Franco-Roumain de Mathématique Appliquées, Bucarest, Roumanie, August 2012.
http://hal. inria. fr/ hal-00740388
Scientific Books (or Scientific Book chapters)
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49M. Thiriet.
Intracellular Signaling Mediators in the Circulatory and Ventilatory Systems., Biomathematical and Biomechanical Modeling of the Circulatory and Ventilatory Systems, Springer New York, October 2012, vol. 4, 1064 p. [ DOI : 10.1007/978-1-4614-4370-4 ]
http://hal. inria. fr/ hal-00762544 -
50M. Thiriet.
Signaling at the Cell Surface in the Circulatory and Ventilatory Systems., Biomathematical and Biomechanical Modeling of the Circulatory and Ventilatory Systems, Springer, 2012, vol. 3, 996 p. [ DOI : 10.1007/978-1-4614-1991-4 ]
http://hal. inria. fr/ hal-00715021
Internal Reports
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51C. Bertoglio, A. Caiazzo, M. A. Fernández Varela.
Fractional-step schemes for the coupling of distributed and lumped models in hemodynamics, Inria, April 2012, no RR-7937.
http://hal. inria. fr/ hal-00690493 -
52C. Bertoglio, D. Chapelle, M. A. Fernández Varela, J.-F. Gerbeau, P. Moireau.
State observers of a vascular fluid-structure interaction model through measurements in the solid, Inria, December 2012, no RR-8177, 50 pages p.
http://hal. inria. fr/ hal-00764332 -
53P. Cazeaux, J. S. Hesthaven.
Multiscale modelling of sound propagation through the lung parenchyma, Inria, September 2012.
http://hal. inria. fr/ hal-00736483 -
54A.-C. Egloffe, A. Gloria, J.-C. Mourrat, T. N. Nguyen.
Random walk in random environment, corrector equation, and homogenized coefficients: from theory to numerics, back and forth, Inria, November 2012, 44 p.
http://hal. inria. fr/ hal-00749667 -
55M. A. Fernández Varela, J. Mullaert, M. Vidrascu.
Explicit Robin-Neumann schemes for the coupling of an incompressible fluid with a general thin-structure, Inria, December 2012, no RR-???. -
56J.-F. Gerbeau, D. Lombardi.
Reduced-Order Modeling based on Approximated Lax Pairs, Inria, November 2012, no RR-8137, 21 p.
http://hal. inria. fr/ hal-00752810 -
57A. Iollo, D. Lombardi.
Advection Modes by Optimal Mass Transfer, Inria, February 2012, 33 p.
http://hal. inria. fr/ hal-00669693
Other Publications
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58L. Boudin, J. Mathiaud.
Asymptotic behavior of a diffusive scheme solving the inviscid one-dimensional pressureless gases system, 2012, submitted.
http://hal. inria. fr/ hal-00765620 -
59M. Boulakia, A.-C. Egloffe, C. Grandmont.
Stability estimates for a Robin coefficient in the two-dimensional Stokes system, 2012.
http://hal. inria. fr/ hal-00582559 -
60M. Boulakia, A.-C. Egloffe, C. Grandmont.
Stability estimates for the unique continuation property of the Stokes system. Application to an inverse problem, 2012, submitted.
http://hal. inria. fr/ hal-00760039 -
61P. Cazeaux, C. Grandmont, Y. Maday.
Homogenization of a model for the propagation of sound in the lungs, 2012, in preparation.
http://hal. inria. fr/ hal-00764982 -
62D. Chapelle, A. Collin, J.-F. Gerbeau.
A surface-based electrophysiology model relying on asymptotic analysis and motivated by cardiac atria modeling, 2012.
http://hal. inria. fr/ hal-00723691 -
63G. Geymonat, S. Hendili, F. Krasucki, M. Vidrascu.
Matched asymptotic expansion method for an homogenized interface model., 2012, submitted.
http://hal. inria. fr/ hal-00757005 -
64S. Martin, A. Decoene, B. Maury.
Microscopic modelling of active bacterial suspensions, 2012.
http://hal. archives-ouvertes. fr/ hal-00601842 -
65S. Martin, B. Maury.
Numerical modeling of the oxygen transfer in the respiratory process, 2012, submitted.
http://hal. archives-ouvertes. fr/ hal-00714239 -
66A. Moussa, F. Sueur.
A 2d spray model with gyroscopic effects, 2013, Asymptotic Analysis.
http://hal. inria. fr/ hal-00713683
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67A. Amsden, P. O'Rourke, T. Butler.
A computer program for chemically reactive flows with sprays, Los Alamos National Laboratory, 1989, no LA-11560-MS. -
68M. A. Biot.
Theory of propagation of elastic waves in a fluid-saturated porous solid. II higher frequency range, in: J. Acoust. Soc. Am., 1956, vol. 28, p. 179–191. -
69D. Chapelle, J. Sainte-Marie, J.-F. Gerbeau, I. Vignon-Clementel.
A poroelastic model valid in large strains with applications to perfusion in cardiac modeling, in: Computational Mechanics, 2010, vol. 46, no 1, p. 91-101. [ DOI : 10.1007/s00466-009-0452-x ]
http://hal. inria. fr/ inria-00542672/ en -
70J. Dupays, Y. Fabignon, P. Villedieu, G. Lavergne, G. Estivalezes.
Some aspects of two phase flows in solid propellant rocket motors, in Solid propellant chemistry, combustion and interior ballistics, in: Progress in Astronautics and Aeronautics, V. Yang, T. Brill, W. Pen (editors), Academic Press, 2000, vol. 185. -
71G. Lines, P. Grottum, A. Tveito.
Modeling the electrical activity of the heart. A bidomain model of the ventricles embedded in a torso., in: Comput. Visual. Sci., 2003, vol. 5, p. 195-213. -
72R. Motte.
A numerical method for solving particle-fluid equations, in: Trends in numerical and physical modeling for industrial multiphase flows, Cargèse, France, 2000. -
73A. Quarteroni, S. Ragni, A. Veneziani.
Coupling between lumped and distributed models for blood flow problems, in: Comput. Visual Sci., 2001, vol. 4, p. 111–124. -
74F. Sachse.
Computational Cardiology: Modeling of Anatomy, Electrophysiology, and Mechanics, Springer-Verlag, 2004. -
75J. Sundnes, G. Lines, X. Cai, B. Nielsen, K.-A. Mardal, A. Tveito.
Computing the electrical activity in the heart, Springer-Verlag, 2006. -
76K. Terzaghi.
Theoretical Soil Mechanics, John Wiley and Sons, New-York, 1943. -
77F. Williams.
Combustion theory, 2nd, Benjamin Cummings, 1985.