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ARAMIS - 2013
ARAMIS - 2013
Team Aramis
Members
Overall Objectives
Research Program
Application Domains
Software and Platforms
New Results
Bilateral Contracts and Grants with Industry
Partnerships and Cooperations
Dissemination
Bibliography
Team Aramis
Members
Overall Objectives
Research Program
Application Domains
Software and Platforms
New Results
Bilateral Contracts and Grants with Industry
Partnerships and Cooperations
Dissemination
Bibliography


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Bibliography

Publications of the year

Articles in International Peer-Reviewed Journals

  • 1Y. Attal, D. Schwartz.

    Assessment of Subcortical Source Localization Using Deep Brain Activity Imaging Model with Minimum Norm Operators: A MEG Study, in: PLoS ONE, 2013, vol. 8, no 3. [ DOI : 10.1371/journal.pone.0059856 ]

    http://hal.inria.fr/hal-00818210
  • 2B. Cazelles, K. Cazelles, M. Chavez.

    Wavelet analysis in ecology and epidemiology: impact of statistical tests, in: Interface, February 2014, vol. 11, no 91. [ DOI : 10.1098/rsif.2013.0585 ]

    http://hal.inria.fr/hal-00938690
  • 3M. Chavez, F. De Vico Fallani, M. Valencia, J. Artieda, D. Mattia, V. Latora, F. Babiloni.

    Node accessibility in cortical networks during motor tasks, in: Neuroinformatics, July 2013, vol. 11, no 3, pp. 355-66. [ DOI : 10.1007/s12021-013-9185-2 ]

    http://hal.inria.fr/hal-00938680
  • 4R. Cuingnet, J. A. Glaunès, M. Chupin, H. Benali, O. Colliot.

    Spatial and Anatomical Regularization of SVM: A General Framework for Neuroimaging Data, in: IEEE Transactions on Pattern Analysis and Machine Intelligence, 2013, vol. 35, no 3, pp. 682-696. [ DOI : 10.1109/TPAMI.2012.142 ]

    http://hal.inria.fr/hal-00790079
  • 5L. C. De Souza, M. Chupin, M. Bertoux, S. Lehéricy, B. Dubois, F. Lamari, I. Le Ber, M. Bottlaender, O. Colliot, M. Sarazin.

    Is Hippocampal Volume a Good Marker to Differentiate Alzheimer's Disease from Frontotemporal Dementia?, in: J Alzheimers Dis, March 2013, vol. 36, no 1, pp. 57-66. [ DOI : 10.3233/JAD-122293 ]

    http://hal.inria.fr/hal-00815740
  • 6F. De Vico Fallani, F. Pichiorri, G. Morone, M. Molinari, F. Babiloni, F. Cincotti, D. Mattia.

    Multiscale topological properties of functional brain networks during motor imagery after stroke, in: NeuroImage, June 2013, vol. 83C, pp. 438-449. [ DOI : 10.1016/j.neuroimage.2013.06.039 ]

    http://hal.inria.fr/hal-00841262
  • 7B. Degos, J.-M. Deniau, M. Chavez, N. Maurice.

    Subthalamic nucleus high-frequency stimulation restores altered electrophysiological properties of cortical neurons in parkinsonian rat, in: PLoS ONE, 2013, vol. 8, no 12. [ DOI : 10.1371/journal.pone.0083608 ]

    http://hal.inria.fr/hal-00938692
  • 8A. Demain, G. W. M. Westby, S. Fernandez-Vidal, C. Karachi, F. Bonneville, M. C. Do, C. Delmaire, D. Dormont, E. Bardinet, Y. Agid, N. Chastan, M.-L. Welter.

    High-level gait and balance disorders in the elderly: a midbrain disease?, in: Journal of Neurology, January 2014, vol. 261, no 1, pp. 196-206. [ DOI : 10.1007/s00415-013-7174-x ]

    http://hal.inria.fr/hal-00938637
  • 9C. Depienne, M. Bugiani, C. Dupuits, D. Galanaud, V. Touitou, N. Postma, C. Van Berkel, E. Polder, E. Tollard, F. Darios, A. Brice, C. E. De Die-Smulders, J. S. Vles, A. Vanderver, G. Uziel, C. Yalcinkaya, S. G. Frints, V. M. Kalscheuer, J. Klooster, M. Kamermans, T. E. Abbink, N. I. Wolf, F. Sedel, M. S. van der Knaap.

    Brain white matter oedema due to ClC-2 chloride channel deficiency: an observational analytical study, in: Lancet Neurology, July 2013, vol. 12, no 7, pp. 659-68. [ DOI : 10.1016/S1474-4422(13)70053-X ]

    http://hal.inria.fr/hal-00938667
  • 10J. Dinkel, A. Drier, O. Khalilzadeh, V. Perlbarg, V. Czernecki, R. Gupta, F. Gomas, P. Sanchez, D. Dormont, D. Galanaud, R. D. Stevens, L. Puybasset.

    Long-term white matter changes after severe traumatic brain injury: a 5-year prospective cohort, in: AJNR - American Journal of Neuroradiology, January 2014, vol. 35, no 1, pp. 23-9. [ DOI : 10.3174/ajnr.A3616 ]

    http://hal.inria.fr/hal-00938606
  • 11T. Dumas, S. Dubal, Y. Attal, M. Chupin, R. Jouvent, S. Morel, N. George.

    MEG Evidence for Dynamic Amygdala Modulations by Gaze and Facial Emotions, in: PLoS ONE, 2013, vol. 8, no 9. [ DOI : 10.1371/journal.pone.0074145 ]

    http://hal.inria.fr/hal-00937137
  • 12S. Durrleman, S. Allassonnière, S. Joshi.

    Sparse Adaptive Parameterization of Variability in Image Ensembles, in: International Journal of Computer Vision, 2013, vol. 101, no 1, pp. 161-183. [ DOI : 10.1007/s11263-012-0556-1 ]

    http://hal.inria.fr/hal-00817565
  • 13S. Durrleman, X. Pennec, A. Trouvé, J. Braga, G. Gerig, N. Ayache.

    Toward a Comprehensive Framework for the Spatiotemporal Statistical Analysis of Longitudinal Shape Data, in: International Journal of Computer Vision, May 2013, vol. 103, no 1, pp. 22-59. [ DOI : 10.1007/s11263-012-0592-x ]

    http://hal.inria.fr/hal-00813825
  • 14A. Fasoula, Y. Attal, D. Schwartz.

    Comparative performance evaluation of data-driven causality measures applied to brain networks, in: Journal of Neuroscience Methods, March 2013, vol. 215, no 2, pp. 170-189. [ DOI : 10.1016/j.jneumeth.2013.02.021 ]

    http://hal.inria.fr/hal-00818207
  • 15J. Lagarde, R. Valabrègue, J.-C. Corvol, I. Le Ber, O. Colliot, M. Vidailhet, R. Levy.

    The clinical and anatomical heterogeneity of environmental dependency phenomena, in: Journal of Neurology, September 2013, vol. 260, no 9, pp. 2262-70. [ DOI : 10.1007/s00415-013-6976-1 ]

    http://hal.inria.fr/hal-00867487
  • 16B. Mathon, A. Nouet, C. Villa, K. Mokhtari, H. Alshehhi, M. Faillot, D. Dormont, P. Cornu, D. Leclercq.

    Teaching neuroimages: Burkitt dural lymphoma mimicking a subacute subdural hematoma, in: Neurology, October 2013, vol. 81, no 17. [ DOI : 10.1212/WNL.0b013e3182a956d0 ]

    http://hal.inria.fr/hal-00938653
  • 17N. Menjot De Champfleur, S. Menjot De Champfleur, D. Galanaud, N. Leboucq, A. Bonafé.

    Imaging of the optic chiasm and retrochiasmal visual pathways, in: Diagn Interv Imaging, October 2013, vol. 94, no 10, pp. 957-71. [ DOI : 10.1016/j.diii.2013.06.012 ]

    http://hal.inria.fr/hal-00878500
  • 18S. Mesmoudi, V. Perlbarg, D. Rudrauf, A. Messe, B. Pinsard, D. Hasboun, C. Cioli, G. Marrelec, R. Toro, H. Benali, Y. Burnod.

    Resting state networks' corticotopy: the dual intertwined rings architecture, in: PLoS ONE, 2013, vol. 8, no 7. [ DOI : 10.1371/journal.pone.0067444 ]

    http://hal.inria.fr/hal-00938595
  • 19V. Nicosia, M. Valencia, M. Chavez, A. Díaz-Guilera, V. Latora.

    Remote synchronization reveals network symmetries and functional modules, in: Physical Review Letters, April 2013, vol. 110, no 17, 174102 p.

    http://hal.inria.fr/hal-00938684
  • 20N. Noel, R. Bernard, B. Wechsler, M. Resche-Rigon, R. Depaz, D. L. T. H. Boutin, J. C. Piette, A. Drier, D. Dormont, P. Cacoub, D. Saadoun.

    Long-Term Outcome of Neuro-Behçet's Disease, in: Arthritis and Rheumatism, January 2014. [ DOI : 10.1002/art.38351 ]

    http://hal.inria.fr/hal-00938604
  • 21A. Peskine, F. Baronnet, E. Bayen, D. Galanaud, P. Pradat-Diehl, C. E. Luyt.

    Long-term functional outcome of cardiac arrest survivors, in: Resuscitation, January 2014. [ DOI : 10.1016/j.resuscitation.2013.12.034 ]

    http://hal.inria.fr/hal-00938661
  • 22I. Rekik, S. Allassonnière, S. Durrleman, T. Carpenter, J. M. Wardlaw.

    Spatiotemporal Dynamic Simulation of Acute Perfusion/Diffusion Ischemic Stroke Lesions Evolution: A Pilot Study Derived from Longitudinal MR Patient Data, in: Computational and Mathematical Methods in Medicine, 2013. [ DOI : 10.1155/2013/283593 ]

    http://hal.inria.fr/hal-00935051
  • 23M. Sharman, R. Valabrègue, V. Perlbarg, L. Marrakchi-Kacem, M. Vidailhet, H. Benali, A. Brice, S. Lehéricy.

    Parkinson's disease patients show reduced cortical-subcortical sensorimotor connectivity, in: Movement Disorders, April 2013, vol. 28, no 4, pp. 447-454. [ DOI : 10.1002/mds.25255 ]

    http://hal.inria.fr/hal-00817580
  • 24M. Teichmann, A. Kas, C. Boutet, S. Ferrieux, M. Nogues, D. Samri, C. Rogan, D. Dormont, B. Dubois, R. Migliaccio.

    Deciphering logopenic primary progressive aphasia: a clinical, imaging and biomarker investigation, in: Brain, November 2013, vol. 136, no Pt 11, pp. 3474-88. [ DOI : 10.1093/brain/awt266 ]

    http://hal.inria.fr/hal-00938644
  • 25M. Valencia, M. Chavez, J. Artieda, J. P. Bolam, J. Mena-Segovia.

    Abnormal functional connectivity between motor cortex and pedunculopontine nucleus following chronic dopamine depletion, in: Journal of Neurophysiology, January 2014, vol. 111, no 2, pp. 434-40. [ DOI : 10.1152/jn.00555.2013 ]

    http://hal.inria.fr/hal-00938678

Articles in National Peer-Reviewed Journals

  • 26O. Colliot, L. Hamelin, M. Sarazin.

    Magnetic resonance imaging for diagnosis of early Alzheimer's disease, in: Rev Neurol (Paris), September 2013, vol. 169, no 10, pp. 724-8. [ DOI : 10.1016/j.neurol.2013.07.013 ]

    http://hal.inria.fr/hal-00867481
  • 27N. Noel, A. Drier, B. Wechsler, J.-C. Piette, R. De Paz, D. Dormont, P. Cacoub, D. Saadoun.

    Manifestations neurologiques de la maladie de Behçet [Neurological manifestations of Behçet's disease], in: La Revue de Médecine Interne, November 2013, vol. 35, no 2, pp. 112-120. [ DOI : 10.1016/j.revmed.2013.10.332 ]

    http://hal.inria.fr/hal-00938640
  • 28L. Vandesteen, A. Drier, D. Galanaud, F. Clarençon, D. Leclercq, C. Karachi, D. Dormont.

    Imaging findings of intraventricular and ependymal lesions, in: Journal de Neuroradiologie / Journal of Neuroradiology, October 2013, vol. 40, no 4, pp. 229-44. [ DOI : 10.1016/j.neurad.2013.06.004 ]

    http://hal.inria.fr/hal-00938655

Invited Conferences

  • 29S. Durrleman.

    Deformetrics: describing and describing anatomical phenotypes with space deformations, in: Rank Prize Funds Symposium on Medical Imaging meets Computer Vision, Grasmere, United Kingdom, 2013.

    http://hal.inria.fr/hal-00935055

International Conferences with Proceedings

  • 30C. Cury, J. A. Glaunès, O. Colliot.

    Template Estimation for Large Database: A Diffeomorphic Iterative Centroid Method Using Currents, in: GSI 2013 - First International Conference Geometric Science of Information, France, F. Nielsena, F. Barbaresco (editors), Lecture Notes in Computer Science, Springer, 2013, vol. 8085, pp. 103-111. [ DOI : 10.1007/978-3-642-40020-9_10 ]

    http://hal.inria.fr/hal-00857440
  • 31J. Fishbaugh, M. Prastawa, G. Gerig, S. Durrleman.

    Geodesic image regression with a sparse parameterization of diffeomorphisms, in: Geometric Science of Information, Paris, France, F. Nielsen, F. Barbaresco (editors), Lecture Notes in Computer Science, Springer, 2013, vol. 8085, pp. 95-102.

    http://hal.inria.fr/hal-00935052
  • 32J. Fishbaugh, M. Prastawa, G. Gerig, S. Durrleman.

    Geodesic Shape Regression in the Framework of Currents, in: Information Processing in Medical Imaging, Asilomar, United States, J. Gee, S. Joshi, K. Pohl, W. Wells, L. Zöllei (editors), Lecture Notes in Computer Science, Springer, 2013, vol. 7917, pp. 718-729.

    http://hal.inria.fr/hal-00935053
  • 33P. Gori, O. Colliot, Y. Worbe, L. Marrakchi-Kacem, S. Lecomte, C. Poupon, A. Hartmann, N. Ayache, S. Durrleman.

    Bayesian Atlas Estimation for the Variability Analysis of Shape Complexes, in: MICCAI 2013 - 16th International Conference on Medical Image Computing and Computer Assisted Intervention, Nagoya, Japan, 2013, pp. P1-21, To appear.

    http://hal.inria.fr/hal-00846604
  • 34P. Gori, O. Colliot, Y. Worbe, L. Marrakchi-Kacem, S. Lecomte, C. Poupon, A. Hartmann, N. Ayache, S. Durrleman.

    Towards joint morphometry of white matter tracts and gray matter surfaces, in: Human Brain Mapping, Seattle, United States, 2013, Organization for Human Brain Mapping 2013.

    http://hal.inria.fr/hal-00816138
  • 35A. Imperiale, A. Routier, S. Durrleman, P. Moireau.

    Improving Efficiency of Data Assimilation Procedure for a Biomechanical Heart Model by Representing Surfaces as Currents, in: FIMH - 7th International Conference on Functional Imaging and Modeling of the Heart - 2013, London, United Kingdom, S. Ourselin, D. Rueckert, N. Smith (editors), Lecture Notes in Computer Science, Springer, 2013, vol. 7945, pp. 342-351. [ DOI : 10.1007/978-3-642-38899-6_41 ]

    http://hal.inria.fr/hal-00841442
  • 36T. Kaaouana, L. De Rochefort, T. Samaille, N. Thierry, G. Chêne, C. Delmaire, D. Dormont, M. Chupin.

    Discriminating brain microbleeds using phase contrast MRI in a multicentre clinical setting, in: 2nd International Workshop on MRI Phase Contrast & Quantitative Susceptibility Mapping (QSM), Ithaca NY, United States, July 2013.

    http://hal.inria.fr/hal-00816031
  • 37A. Valsecchi, S. Damas, J. Santamaria, L. Marrakchi-Kacem.

    Genetic Algorithms for Voxel-based Medical Image Registration, in: SSCI-IEEE Symposium Series on Computational Intelligence, Singapore, April 2013.

    http://hal.inria.fr/hal-00816711
  • 38A. Valsecchi, D.-L. Jérémie, S. Thomas, S. Damas, J. Santamaria, L. Marrakchi-Kacem.

    Evolutionary Medical Image Registration using Automatic Parameter Tuning, in: CEC-IEE- IEEE Congress On Evolutionary Computation, Cancun, Mexico, June 2013.

    http://hal.inria.fr/hal-00817097

Conferences without Proceedings

  • 39J. Dumoncel, S. Durrleman, J. Braga, J.-P. Jessel, G. Subsol.

    Landmark-free 3D method for comparison of fossil hominins and hominids based on endocranium and EDJ shapes, in: 83th Annual Meeting of the American Association of Physical Anthropologists, Calgary, Canada, 2014.

    http://hal.inria.fr/hal-00935054

Scientific Books (or Scientific Book chapters)

  • 40C. Cury, J. A. Glaunès, O. Colliot.

    Diffeomorphic Iterative Centroid Methods for Template Estimation on Large Datasets, in: Geometric Theory of Information, F. Nielsen (editor), Springer, 2014, vol. Chapter 4.

    http://hal.inria.fr/hal-00939326
  • 41B. Ng, M. Toews, S. Durrleman, Y. Shi.

    Shape Analysis for Brain Structures: A Review, in: Shape Analysis in Medical Image Analysis, S. Li, J. M. R. S. Tavares (editors), Lecture Notes in Computational Vision and Biomechanics, Springer, 2014, vol. 14.

    http://hal.inria.fr/hal-00925536

Books or Proceedings Editing

  • 42X. Pennec, S. Joshi, M. Nielsen, T. P. Fletcher, S. Durrleman, S. Sommer (editors)

    Proceedings of the Fourth International Workshop on Mathematical Foundations of Computational Anatomy - Geometrical and Statistical Methods for Biological Shape Variability Modeling (MFCA 2013), Nagoya, Japan, Inria, August 2013, 132 p.

    http://hal.inria.fr/hal-00873631

Other Publications

  • 43F. D. V. Fallani, V. Nicosia, V. Latora, M. Chavez.

    Non-parametric resampling of random walks for spectral network clustering, 2013, 5 p.

    http://hal.inria.fr/hal-00817918


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