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ARAMIS - 2014
ARAMIS - 2014
Project-Team Aramis
Members
Overall Objectives
Research Program
Application Domains
New Software and Platforms
New Results
Bilateral Contracts and Grants with Industry
Partnerships and Cooperations
Dissemination
Bibliography
Project-Team Aramis
Members
Overall Objectives
Research Program
Application Domains
New Software and Platforms
New Results
Bilateral Contracts and Grants with Industry
Partnerships and Cooperations
Dissemination
Bibliography


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Bibliography

Publications of the year

Doctoral Dissertations and Habilitation Theses

Articles in International Peer-Reviewed Journals

  • 2P. Besson, V. Dinkelacker, R. Valabregue, L. Thivard, X. Leclerc, M. Baulac, D. Sammler, O. Colliot, S. Lehéricy, S. Samson, S. Dupont.

    Structural connectivity differences in left and right temporal lobe epilepsy, in: NeuroImage, October 2014, pp. 135-44.

    https://hal.inria.fr/hal-01098831
  • 3C. Boutet, M. Chupin, S. Lehéricy, L. Marrakchi-Kacem, S. Epelbaum, C. Poupon, C. Wiggins, A. Vignaud, D. Hasboun, B. Defontaines, O. Hanon, B. Dubois, M. Sarazin, L. Hertz-Pannier, O. Colliot.

    Detection of volume loss in hippocampal layers in Alzheimer's disease using 7 T MRI: a feasibility study, in: Neuroimage: Clinical, July 2014, vol. 5, pp. 341-8.

    https://hal.inria.fr/hal-01099185
  • 4P. Caroppo, I. Le Ber, A. Camuzat, F. Clot, L. Naccache, F. Lamari, A. De Septenville, A. Bertrand, S. Belliard, D. Hannequin, O. Colliot, A. Brice.

    Extensive white matter involvement in patients with frontotemporal lobar degeneration: think progranulin, in: JAMA Neurology, December 2014, pp. 1562-6.

    https://hal.inria.fr/hal-01098828
  • 5G. Castagneto-Gissey, M. Chavez, F. De Vico Fallani.

    Dynamic Granger-causal networks of electricity spot prices: A novel approach to market integration, in: Energy Economics, May 2014, vol. 44, pp. 422-432. [ DOI : 10.1016/j.eneco.2014.05.008 ]

    https://hal.inria.fr/hal-01023418
  • 6E. Cavedo, S. Lista, Z. S. Khachaturian, P. S. Aisen, P. Amouyel, K. Herholz, C. Jack, R. Sperling, J. Cummings, K. Blennow, S. O'Bryant, G. Frisoni, A. Khachaturian, M. Kivipelto, W. Klunk, K. Broich, S. Andrieu, M. Thiebaut De Schotten, J.-F. Mangin, A. Lammertsma, K. Johnson, S. J. Teipel, A. Drzezga, A. L. W. Bokde, O. Colliot, H. Bakardjian, H. Zetterberg, B. Dubois, B. Vellas, L. Schneider, H. Hampel.

    The road ahead to cure Alzheimer’s disease: development of biological markers and neuroimaging methods for prevention trials across all stages and target populations, in: Journal of Prevention of Alzheimer's Disease, December 2014, vol. 1, no 3, pp. 181-202.

    https://hal.inria.fr/hal-01098836
  • 7B. Cazelles, K. Cazelles, M. Chavez.

    Wavelet analysis in ecology and epidemiology: impact of statistical tests, in: Interface, February 2014, vol. 11, no 91, 20130585. [ DOI : 10.1098/rsif.2013.0585 ]

    https://hal.inria.fr/hal-00938690
  • 8R. Colle, M. Chupin, C. Cury, C. Vandendrie, F. Gressier, P. Hardy, B. Falissard, O. Colliot, D. Ducreux, E. Corruble.

    Depressed suicide attempters have smaller hippocampus than depressed patients without suicide attempts, in: Journal of Psychiatric Research, February 2015, vol. 61, 6 p. [ DOI : 10.1016/j.jpsychires.2014.12.010 ]

    https://hal.inria.fr/hal-01108928
  • 9F. De Vico Fallani, M. Corazzol, J. Sternberg, C. Wyart, M. Chavez.

    Hierarchy of Neural Organization in the Embryonic Spinal Cord: Granger-Causality Graph Analysis of Calcium Imaging Data, in: IEEE Transactions on Neural Systems and Rehabilitation Engineering, August 2014, 10 p. [ DOI : 10.1109/TNSRE.2014.2341632 ]

    https://hal.inria.fr/hal-01112731
  • 10F. De Vico Fallani, V. Nicosia, V. Latora, M. Chavez.

    Nonparametric resampling of random walks for spectral network clustering, in: Physical Review E, January 2014, vol. 89, no 1, 012802. [ DOI : 10.1103/PhysRevE.89.012802 ]

    https://hal.inria.fr/hal-00992974
  • 11F. De Vico Fallani, J. Richiardi, M. Chavez, S. Achard.

    Graph analysis of functional brain networks: practical issues in translational neuroscience, in: Philosophical Transactions B: Biological Sciences, October 2014, vol. 369, no 1653, 20130521. [ DOI : 10.1098/rstb.2013.0521 ]

    https://hal.inria.fr/hal-01062386
  • 12A. Demain, G. W. M. Westby, S. Fernandez-Vidal, C. Karachi, F. Bonneville, M. C. Do, C. Delmaire, D. Dormont, E. Bardinet, Y. Agid, N. Chastan, M.-L. Welter.

    High-level gait and balance disorders in the elderly: a midbrain disease?, in: Journal of Neurology, January 2014, vol. 261, no 1, pp. 196-206. [ DOI : 10.1007/s00415-013-7174-x ]

    https://hal.archives-ouvertes.fr/hal-00954526
  • 13J. Dinkel, A. Drier, O. Khalilzadeh, V. Perlbarg, V. Czernecki, R. Gupta, F. Gomas, P. Sanchez, D. Dormont, D. Galanaud, R. D. Stevens, L. Puybasset.

    Long-term white matter changes after severe traumatic brain injury: a 5-year prospective cohort, in: AJNR - American Journal of Neuroradiology, January 2014, vol. 35, no 1, pp. 23-9. [ DOI : 10.3174/ajnr.A3616 ]

    https://hal.inria.fr/hal-00938606
  • 14S. Durrleman, M. Prastawa, N. Charon, J. R. Korenberg, S. Joshi, G. Gerig, A. Trouvé.

    Morphometry of anatomical shape complexes with dense deformations and sparse parameters, in: NeuroImage, 2014. [ DOI : 10.1016/j.neuroimage.2014.06.043 ]

    https://hal.inria.fr/hal-01015771
  • 15H. Hampel, S. Lista, S. J. Teipel, F. Garaci, R. Nisticò, K. Blennow, H. Zetterberg, L. Bertram, C. Duyckaerts, H. Bakardjian, A. Drzezga, O. Colliot, S. Epelbaum, K. Broich, S. Lehéricy, A. Brice, Z. S. Khachaturian, P. S. Aisen, B. Dubois.

    Perspective on future role of biological markers in clinical therapy trials of Alzheimer's disease: a long-range point of view beyond 2020, in: Biochemical Pharmacology, April 2014, pp. 426-49.

    https://hal.inria.fr/hal-01098832
  • 16T. Kaaouana, L. De Rochefort, T. Samaille, N. Thiery, C. Dufouil, C. Delmaire, D. Dormont, M. Chupin.

    2D harmonic filtering of MR phase images in multicenter clinical setting: Toward a magnetic signature of cerebral microbleeds, in: NeuroImage, January 2015, vol. 104, 14 p. [ DOI : 10.1016/j.neuroimage.2014.08.024 ]

    https://hal.inria.fr/hal-01108916
  • 17D. La Rocca, P. Campisi, B. Vegso, P. Cserti, G. Kozmann, F. Babiloni, F. De Vico Fallani.

    Human brain distinctiveness based on EEG spectral coherence connectivity, in: IEEE Transactions on Biomedical Engineering, April 2014, epub ahead of print, forthcoming. [ DOI : 10.1109/TBME.2014.2317881 ]

    https://hal.inria.fr/hal-00992996
  • 18N. Noel, R. Bernard, B. Wechsler, M. Resche-Rigon, R. Depaz, D. L. T. H. Boutin, J. C. Piette, A. Drier, D. Dormont, P. Cacoub, D. Saadoun.

    Long-Term Outcome of Neuro-Behçet's Disease, in: Arthritis and Rheumatism, January 2014. [ DOI : 10.1002/art.38351 ]

    https://hal.inria.fr/hal-00938604
  • 19A. Peskine, F. Baronnet, E. Bayen, D. Galanaud, P. Pradat-Diehl, C. E. Luyt.

    Long-term functional outcome of cardiac arrest survivors, in: Resuscitation, January 2014, epub ahead of print, forthcoming. [ DOI : 10.1016/j.resuscitation.2013.12.034 ]

    https://hal.inria.fr/hal-00938661
  • 20M. Tchikviladzé, M. Gilleron, T. Maisonobe, D. Galanaud, P. Laforêt, A. Durr, B. Eymard, F. Mochel, H. Ogier, A. Béhin, T. Stojkovic, B. Degos, I. Gourfinkel-An, F. Sedel, M. Anheim, A. Elbaz, K. Viala, M. Vidailhet, A. Brice, C. Jardel, A. Lombès.

    A diagnostic flow chart for POLG-related diseases based on signs sensitivity and specificity, in: Journal of Neurology, Neurosurgery and Psychiatry, August 2014, epub ahead of print, forthcoming. [ DOI : 10.1136/jnnp-2013-306799 ]

    http://www.hal.inserm.fr/inserm-01067950
  • 21M. Valencia, M. Chavez, J. Artieda, J. P. Bolam, J. Mena-Segovia.

    Abnormal functional connectivity between motor cortex and pedunculopontine nucleus following chronic dopamine depletion, in: Journal of Neurophysiology, January 2014, vol. 111, no 2, pp. 434-40. [ DOI : 10.1152/jn.00555.2013 ]

    https://hal.inria.fr/hal-00938678

International Conferences with Proceedings

  • 22C. Cury, J. A. Glaunès, M. Chupin, O. Colliot.

    Fast Template-based Shape Analysis using Diffeomorphic Iterative Centroid, in: MIUA 2014 - Medical Image Understanding and Analysis 2014, Egham, United Kingdom, C. C. Reyes-Aldasoro, G. Slabaugh (editors), July 2014, pp. 39-44.

    https://hal.inria.fr/hal-01050590
  • 23J. Fishbaugh, M. Prastawa, G. Gerig, S. Durrleman.

    Geodesic regression of image and shape data for improved modeling of 4D trajectories, in: ISBI 2014 - 11th International Symposium on Biomedical Imaging, Beijin, China, IEEE, April 2014, pp. 385 - 388. [ DOI : 10.1109/ISBI.2014.6867889 ]

    https://hal.inria.fr/hal-01108243
  • 24P. Gori, O. Colliot, L. Marrakchi-Kacem, Y. Worbe, F. De Vico Fallani, M. Chavez, S. Lecomte, C. Poupon, A. Hartmann, N. Ayache, S. Durrleman.

    A Prototype Representation to Approximate White Matter Bundles with Weighted Currents, in: MICCAI 2014 - 17th International Conference on Medical Image Computing and Computer Assisted Intervention, Boston, United States, September 2014.

    https://hal.inria.fr/hal-01010702
  • 25A. B. Graciano Fouquier, S. Durrleman, J. Yelnik, S. Fernandez-Vidal, E. Bardinet.

    Iconic-Geometric Nonlinear Registration of a Basal Ganglia Atlas for Deep Brain Stimulation Planning, in: 2nd International MICCAI Workshop on Deep Brain Stimulation Methodological Challenges (DBSMC), Boston, United States, September 2014.

    https://hal.inria.fr/hal-01108191
  • 26P. Muralidharan, J. Fishbaugh, H. J. Johnson, S. Durrleman, J. S. Paulsen, G. Gerig, T. P. Fletcher.

    Diffeomorphic Shape Trajectories for Improved Longitudinal Segmentation and Statistics, in: 17th International Conference on Medical Image Computing and Computer-Assisted Intervention - MICCAI 2014, Boston, United States, P. Golland, N. Hata, C. Barillot, J. Hornegger, R. Howe (editors), Lecture Notes in Computer Science, Springer, September 2014, vol. 8675, pp. 49 - 56. [ DOI : 10.1007/978-3-319-10443-0_7 ]

    https://hal.inria.fr/hal-01108237
  • 27A. Routier, P. Gori, A. B. Graciano Fouquier, S. Lecomte, O. Colliot, S. Durrleman.

    Evaluation of morphometric descriptors of deep brain structures for the automatic classification of patients with Alzheimer’s disease, mild cognitive impairment and elderly controls, in: MICCAI Workshop, Cambridge, United States, Challenge on Computer-Aided Diagnosis of Dementia Based on Structural MRI Data, September 2014, 8 p.

    https://hal.inria.fr/hal-01099081

National Conferences with Proceedings

  • 28S. Durrleman.

    Outils statistiques pour l'analyse de formes dans des bases de données longitudinales : Applications à la neuro-anatomie normale et pathologique, in: Reconnaissance de Formes et Intelligence Artificielle (RFIA) 2014, Rouen, France, June 2014, 6 p.

    https://hal.archives-ouvertes.fr/hal-00988878

Conferences without Proceedings

  • 29A. T. Bertrand, F. Ameur, P. Caroppo, D. Dormont, A. Brice, I. Le Ber, O. Colliot.

    Incidence and characterization of supratentorial FLAIR hyperintenstities in patients with sporadic and genetic frontotemporal dementia, in: AAIC 2014 - Alzheimer's Association International Conference, Copenhagen, Denmark, July 2014.

    https://hal.inria.fr/hal-01114135
  • 30P. Caroppo, M.-O. Habert, S. Durrleman, H. Bertin, A. Routier, V. Perlbarg, D. Hannequin, B. Pinsart, R. Valabregue, V. Deramecourt, F. Pasquier, S. Rivaud-Pechoux, M. Vercelletto, A. Bouyahia, G. Edouart, A. Guignebert, H. Benali, S. Lehericy, O. Colliot, A. Brice, I. Le Ber.

    Multimodal neuroimaging study in presymptomatic GRN mutations carriers, in: 9th International Conference on Frontotemporal Dementias (ICFTD), Vancouver, Canada, October 2014.

    https://hal.inria.fr/hal-01114134
  • 31J. Dumoncel, S. Durrleman, J. Braga, J.-P. Jessel, G. Subsol.

    Landmark-free 3D method for comparison of fossil hominins and hominids based on endocranium and EDJ shapes, in: 83th Annual Meeting of the American Association of Physical Anthropologists, Calgary, Canada, April 2014.

    https://hal.inria.fr/hal-00935054
  • 32L. Hamelin, L. Cruz De Souza, F. Corlier, H. Corne, M. Chupin, B. Dubois, M. Bottlaender, O. Colliot, M. Sarazin.

    Improved accuracy of the diagnosis of early Alzheimer’s disease using combined measures of hippocampal volume and sulcal morphology, in: AAN 2014 - Annual Meeting of the American Academy of Neurology, Philadelphia, United States, April 2014.

    https://hal.inria.fr/hal-01114138
  • 33L. Marrakchi-Kacem, A. Vignaud, J. Germain, J. Sein, T. R. Henry, P. Cyril, L. Hertz-Pannier, S. Lehericy, O. Colliot, P.-F. Van De Moortele, M. Chupin.

    Slab registration as a first step towards hippocampus subparts high resolution imaging at 7T, in: ISMRM 2014 - Annual Meeting of the International Society for Magnetic Resonance in Medicine, Milan, Italy, May 2014.

    https://hal.inria.fr/hal-01114137

Scientific Books (or Scientific Book chapters)

  • 34Spatio-temporal Image Analysis for Longitudinal and Time-Series Image Data, Lecture notes in computer science, Springer International Publishing, Cambridge, United States, January 2015, vol. 8682, 89 p. [ DOI : 10.1007/978-3-319-14905-9 ]

    https://hal.inria.fr/hal-01114150
  • 35O. Colliot.

    Biomarqueurs IRM de la maladie d’Alzheimer : apport du traitement des images, in: Vieillissement et démences : un défi médical, scientifique et socio-économique, T. Jean-Paul, H. Jean-Jacques, P. Vassilios (editors), Rapports de l’Académie Nationale de Médecine, Lavoisier, 2014, pp. 25-37.

    https://hal.inria.fr/hal-01098841
  • 36C. Cury, J. A. Glaunès, O. Colliot.

    Diffeomorphic Iterative Centroid Methods for Template Estimation on Large Datasets, in: Geometric Theory of Information, F. Nielsen (editor), Springer, 2014, vol. Chapter 10, pp. 273-299. [ DOI : 10.1007/978-3-319-05317-2_10 ]

    https://hal.inria.fr/hal-00939326
  • 37B. Ng, M. Toews, S. Durrleman, Y. Shi.

    Shape Analysis for Brain Structures: A Review, in: Shape Analysis in Medical Image Analysis, S. Li, J. M. R. S. Tavares (editors), Lecture Notes in Computational Vision and Biomechanics, Springer, 2014, vol. 14.

    https://hal.inria.fr/hal-00925536


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