Section: Dissemination

Teaching - Supervision - PhD and HDR defence committees

Teaching

We indicate here only the courses given by scientific staff members who do not have a teaching position. Benoît Perthame gives courses at UPMC.

Luis Ameida is in charge of the Major MathBio of the speciality “Mathematics of modelling”, M2 level, UPMC.

• Luis Almeida, 2017

  Tissue growth (with Delphine Salort, IBPS). UPMC M2 course, Paris 20 h

• Pierre-Alexandre Bliman, 2017

  Analysis, Graduate cycle, School of Applied Mathematics, Fundação Getulio Vargas, Rio de Janeiro, Brazil 60 h

  and Calculus III, Graduate cycle, School of Applied Mathematics, Fundação Getulio Vargas, Rio de Janeiro, Brazil 30 h

  and Control theory, Graduate cycle, School of Industrial Management, Université Mohamed 6 Polytechnique, Ben Guerir, Morocco 6 h

• Jean Clairambault, 2017

  International course on stem cells, UPMC, September 2017 2 h

  and Spring school on systems biology, Instituto Gulbenkian de Ciência, Lisbon, May 2017 6 h

• Marie Doumic, 2017

  Direct and inverse problems in population dynamics (with P. Moireau, Inria M3DISIM). UPMC M2 course, Paris 24 h / yr

• Dirk Drasdo, 2017

  Agent-based models of tissue organisation, UPMC M2 course, Paris 24 h / yr

  University of Rome: Tutorial, 2h: TiSim: A modelling tool for multicellular simulations

Supervision

PhD defences in 2017

• Aurora Armiento, “Inverse problems and data assimilation methods applied on protein polymerisation”, UPMC, begun September 2013, supervision by M. Doumic and Ph. Moireau (Inria Saclay, M3DISIM team), PhD defence January 2017, UPMC

• Giulia Fabrini “Numerical methods for optimal control problems with biological applications”, supervision by L. Almeida and P. Bagnerini (University of Genova, Italy), PhD defence April 2017, Univ. Genova

• Walid Djema, “Understanding Cell Dynamics in Cancer from Control and Mathematical Biology Standpoints: Particular Insights into the Modelling and Analysis Aspects in Hematopoietic Systems and Leukemia”, supervision by C. Bonnet (DISCO, Saclay), J. Clairambault, and F. Mazenc (DISCO, Saclay), PhD defence November 2017, L2S, Gif/Yvette

Ongoing PhD theses

• PhD in progress: Noémie Boissier (since November 2013, PhD defence in February 2018), supervision by D. Drasdo and I. Vignon-Clementel

• PhD in progress: Julia Delacour (since September 2017), supervision by Marie Doumic and Christian Schmeiser (WPI, Vienna)

• PhD in progress: Adrian Friebel, “Software of image processing and analysis of liver tissue at histological scales”, supervision by D. Drasdo and S. Hoehme

• PhD in progress: Ghassen Haddad, “Optimisation of cancer treatments”, UPMC in co-tutela with ENIT Tunis, begun October 2015, supervision by J. Clairambault and S. Ben Miled (Tunis)

• PhD in progress: Hugo Martin, “New structured population models for bacterial growth", begun October 2016, supervision by M. Doumic in co-tutela with Pierre Gabriel (Versailles)

• PhD in progress: Mathieu Mézache, begun October 2016, “Oscillatory dynamics in protein aggregation", supervision by M. Doumic in co-tutela with Human Rezaei (INRA)

• PhD in progress: Johannes Neitsch, “Growth and regeneration modelling based on an agent-based model with deformable cells”, (since June 2011), supervision by D. Drasdo and P. Van Liedekerke

• PhD in progress: Pastor Pérez-Estigarribia, Universidad Nacional de Asunción, Paraguay, supervision by C. Schaerer and P.-A. Bliman

• PhD in progress: Camille Pouchol, “Modelling interactions between tumour cells and adipocytes in breast cancer”, UPMC, begun September 2015, supervision by J. Clairambault, M. Sabbah, and E. Trélat

• PhD in progress: Antonin Prunet, UPMC, begun October 2014, supervision by L. Almeida and M. Sabbah

• PhD in progress: Andrada Quillas Maran, “Modelling early leukaemogenesis”, UPMC, begun March 2014, supervision by J. Clairambault, F. Delhommeau and B. Perthame

• PhD in progress: Martin Strugarek, “Structured population dynamics for transmissible diseases”, UPMC, begun October 2015, supervision by N. Vauchelet and B. Perthame

• PhD in progress: Cécile Taing, UPMC, begun October 2014, supervision by A. Lorz and B. Perthame

PhD and HDR defence committees

• Luis Almeida: Giulia Fabrini, “Numerical methods for optimal control problems with biological applications”, PhD defence April 26, 2017, Genova (Italy)

• Jean Clairambault: Cécile Carrère, “Prise en compte de l'hétérogénéité tumorale dans l'optimisation d'une chimiothérapie : contrôle optimal, analyse théorique et numérique”, PhD defence October 6, 2017, Marseille

• Jean Clairambault: Sébastien Benzekry (HDR), “Contributions in Mathematical Oncology: When Theory Meets Reality”, HDR defence November 13, 2017, Bordeaux

• Jean Clairambault: Walid Djema, “Understanding Cell Dynamics in Cancer from Control and Mathematical Biology Standpoints: Particular Insights into the Modelling and Analysis Aspects in Hematopoietic Systems and Leukemia”, PhD defence November 21, 2017, Gif/Yvette

• Marie Doumic: Aurora Armiento, “Inverse problems and data assimilation methods applied on protein polymerisation”, UPMC, PhD defence January 13, 2017, UPMC

• Marie Doumic: Apollos Besse, “Modélisation mathématique de la leucémie myéloïde chronique", PhD defence July 6, University Lyon 1

• Marie Doumic: Aline Marguet, “Processus de branchement pour des populations structurées et estimateurs pour la division cellulaire”, PhD defence November 27, 2017, Ecole Polytechnique

• Benoît Perthame: Giulia Fabrini, “Numerical methods for optimal control problems with biological applications”, PhD defence April 26, 2017, Genova (Italy)