Section: Dissemination

Promoting Scientific Activities

Scientific Events: Organisation

General Chair, Scientific Chair

• Eric Tannier was the organizing committee chair of the Inria scientific days, July 2019.

Member of the Organizing Committees

• Guillaume Beslon and Anton Crombach, members of the organizing committee of MMEE 2019 (Mathematical Modeling in Ecology and Evolution, Lyon, July 2019)

• Guillaume Beslon : member of the organizing committee of the EvoLyon Day (Lyon, November 2019)

• Guillaume Beslon : member of the organizing committee of BDA 2019 (Bases de Données Avancées, Lyon, October 2019)

• Anton Crombach was part of the organizing and scientific committees of the winter course "Advanced Lectures in Computational Systems Biology" in Aussois.

• Hugues Berry was a member of the Local Organising Committee for conference MedInfo 2019 (https://www.medinfo-lyon.org/en/)

• Eric Tannier is a member of the organizing committee of "SEMOVI", séminaire de modélisation du vivant, a local scientifica animation in systems biology.

Scientific Events: Selection

Chair of Conference Program Committees

• Eric Tannier was the program committee chair of the Inria scientific days, July 2019.

Member of the Conference Program Committees

• Anton Crombach, involved in the selection of talks and posters for MMEE (Mathematical models in ecology and evolution, Lyon, July)

• Christophe Rigotti, member of the program committee of the 19th IEEE International Conference on Data Mining (ICDM).

• Christophe Rigotti, member of the program committee of the 34rd ACM Symposium On Applied Computing (SAC).

• Guillaume Beslon and Jonathan Rouzaud-Cornabas, members of the program committee of ALife 2019 (2019 Conference on Artificial Life. Newcastle. United Kingdom)

• Eric Tannier, member of the program committee of Jobim 2020

• Eric Tannier, member of the program committee of RECOMB Comparative Genomics 2019

• Eric Tannier, member of the program committee of ISBM/ECCB 2019

Reviewer

• Eric Tannier reviewed for RECOMB 2020

Journal

Member of the Editorial Boards

• Hugues Berry is Associate Editor for PLoS Computational Biology

• Eric Tannier is a guest editor for the epijournal DMTCS, and edited a special issue in 2019

• Eric Tannier is an editor of "Peer Community in Evolutionary Biology"

• Eric Tannier is a founding editor of "Peer Community in Mathematical and Computational Biology"

Reviewer - Reviewing Activities

• Bioinformatics, Journal of Experimental Zoology Part B...

Invited Talks

• Carole Knibbe, 2019 Gordon Conference on "Organismal, Cellular, Molecular and Theoretical Approaches to Understanding Evolution", Easton, MA, USA, June 9-14 2019.

• Anton Crombach, lab seminar at LBMC

• Anton Crombach, lab seminar at LBBE

• Anton Crombach, invited speaker at the EvoLyon conference in november 2019

• Hugues Berry, Artificial Intelligence and Health: the ambition of the French Plan, Aviesan Meeting, Brussels Belgium, Dec. 2019

• Hugues Berry, An introduction to the theoretical models for passive molecule movements in living cells, Action Nationale de Formation du CNRS, Measurement of Molecular Dynamics in Living Cells, Lille, France, Oct. 2019

• Hugues Berry, Searching for deterministic chaos in biological data,Dynamical Systems and Applications to Biology, CIMPA School, Dhaka, Bangladesh, June 2019

• Hugues Berry, Anomalous diffusion in living cells : bridging the gap between experiments and models through collaborative challenges, Random Walks and Intracellular Transport, School of Mathematics, University of Manchester, Manchester, UK, April 2019

• Hugues Berry, Investigating the effect of the nanoscale architecture of astrocytic processes on the propagation of calcium signals, Tampere University of Technology, Tampere, Finland, April 2019

• Hugues Berry, Inria research at the forefront of digital sciences for medicine, 2019 French-American Innovation Day (FAID2019), Houston, Texas, USA, march 2019

• Carole Knibbe, Eric Tannier, Which social and environmental responsibility for researchers, lab seminar at LBMC

• Eric Tannier, open science as an institutional response to the editorial crisis in research, "open science day" of the research biology federation, Lyon.

• Guillaume Beslon, invited talk at UGA (séminaire "Translation et Innovation en Médecine et Complexité”) in November 2019

• Guillaume Beslon, invited talk at the I4ID 2019 conference (Immunotherapies & Innovations for Infectious Diseases Congress, Lyon, December 2019)

Leadership within the Scientific Community

• Anton Crombach is the lead editor of book "Evolutionary Systems Biology, 2nd edition" (ongoing work).

• Hugues Berry organised the 1st Singapore-France Joint Workshop on AI in Health, in association with the international conference MedInfo (https://medinfo-lyon.org/en/), Lyon, France, August 27-29, 2019.

• Hugues Berry co-organized the INSERM Workshop “Intracellular dynamics of molecules: analysis and models” (https://research.pasteur.fr/en/event/intracellular-dynamics-of-molecules-analysis-and-models/). The workshop combined a 3-day critical assessment phase (in Bordeaux, France, June 24-26 2019) and a 3-day technical worskshop (in Lyon, France, July 1-3 2019). This workshop addressed a biologist audience and covered the main experimental methods to quantify the mobility and trajectories of biomolecules in living cells, with an emphasis on the quantification methods for individual trajectories and the interest of computer simulations for analysis and interpretation.

• Carole Knibbe and Guillaume Beslon (together with Dusan Misevic from the Center for Research and Interdisciplinarity in Paris) edited a special issue of the Artificial Life journal (vol25 issue 4, nov 2019), with extended versions of the best papers of ECAL 2017. Link : https://www.mitpressjournals.org/doi/abs/10.1162/artl_a_00298?af=R

Scientific Expertise

• Hugues Berry, Reviewer for the Fond National de la Recherche Scientifique (FNRS, Belgium) for the call "FRQ-FNRS Québec - Communauté française de Belgique"

Research Administration

• Christophe Rigotti, elected member of Insa Scientific board (Conseil scientifique)

• Eric Tannier, elected member of the Inria Administration Council

• Eric Tannier, member of the open science committee of the French Ministry of research

• Eric Tannier, member of the ethics platform of the university of Lyon

• Eric Tannier, member of the "Sciences Environments Societies" workgroup of Inria

• Eric Tannier, member of the Environmental responsibility workgroup of LBBE

• Eric Tannier, scientific responsible of the "cours colloques" committee of Inria

• Eric Tannier, member of the scientific committee of the science shop, univ Lyon

• Hugues Berry, Deputy scientific director of Inria for digital biology and health

• Guillaume Beslon, member of the ANR CE45 committee (Mathématiques et sciences du numérique pour la biologie et la santé)

• Guillaume Beslon, member of the IRD CSS5 committee (Science des données et des modèles)