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Section: New Software and Platforms

NAFRAGDB

Databases of nucleic acids fragments bound to proteins

Keywords: Structural Biology - Nucleic Acids - Data base

Functional Description: NAfragDB is a python-based software for (i) the automated parsing, correction and annotation of all protein - nucleic acid structures in the public Protein Data Bank, (ii) the creation of libraries of non-redundant RNA/DNA structural fragments, (iii) the selection of sets of structures by customized queries, and (iv) the computation of statistics on sets of RNA/DNA - protein structures.

  • Contact: Isaure Chauvot de Beauchêne