Section: Dissemination

Teaching - Supervision - Juries

Teaching

• Licence : A. Mucherino, R. Andonov, P. Peterlongo, Graph algorithms, 130h, L3, Univ. Rennes 1, Rennes France.

• Licence : R. Andonov, Algorithmics, 20h, L3, Univ. Rennes 1, Rennes France.

• Licence : D. Lavenier, Computer Architecture and system , 70 h, L3 - ENS Magister, Rennes, France

• Master : R. Andonov, Advanced algorithmics, 20h, M1, Univ. Rennes 1, Rennes France.

• Master : R. Andonov, A. Mucherino, Operations research, 94h, M1, Univ. Rennes 1, France.

• Master : G. Chapuis, Compilation, 41h, M1, Univ. Rennes 1, France.

• Master : D. Lavenier, Bioinformatics, 20h, M2, Angers, France

• Master : A. Mucherino, Initiation to systems and networks, 41h, M2, Univ. Rennes 1, France

• Master : C. Lemaitre, P. Peterlongo, Text algorithmics for Bioinformatics, 40 h, M1, Univ. Rennes 1, France.

• Master : C. Lemaitre, Dynamical systems for biological networks, 23h, M2, Univ. Rennes 1, France

• Master : F. Legeai, Bioinformatics, 4h, M2, Univ. Rennes 1, France.

• Master : A. Mucherino, R. Andonov, P. Peterlongo, Sequence and structure algorithms, 50h, M2, Univ. Rennes 1, France

Supervision

• PhD Defense: Rayan Chikhi, Computational methods for de novo assembly of next-generation sequencing data [10] , ENS Cachan, defended on July 2nd 2012, supervised by D. Lavenier [online manuscript: http://tel.archives-ouvertes.fr/tel-00752033/]

• PhD in progress : Guillaume Chapuis, Bioinformatique parallèle, Univ. Rennes 1, started in October 2010, supervised by D. Lavenier and R. Andonov

• PhD in progress : Mathilde Le Boudic-Jamin, Through Flexible Protein-Protein Docking, Univ. Rennes 1, started in October 2011, supervised by R. Andonov

• PhD in progress : Nicolas Maillet, Algorithme pour l'assemblage de données NGS de métagénomique, Univ. Rennes 1, started in November 2010, supervised by D. Lavenier and P. Peterlongo

• PhD in progress : Erwan Scaon, Modèles et algorithmes pour l'assemblage de novo de génomes à forte redondance, Univ. Rennes 1, started in October 2012, supervised by D. Lavenier and C. Lemaitre

• PhD in progress : François Moreews, Environnement intégré de conception et d’exécution de workflows en bioinformatique: du prototypage au calcul intensif. Applications à la recherche de motifs de régulation dans les génomes, Univ. Rennes 1, started in November 2012, supervised by D. Lavenier and S. Lagarigue

Juries

• President of Ph-D thesis jury. N. Abbas, ENS Cachan [R. Andonov]

• Member of Ph-D thesis juries. I. Wohlers, Univ. Amsterdam [R. Andonov], A. Nicolas, Université de Rennes 1 [R. Andonov], R. Saidi, Université de Clermont-Ferrand [R. Andonov], O. Gaci Université du Havre [R. Andonov]

• Referee of Ph-D thesis. T. Tan Truan, Université de Lille [D. Lavenier]