Bibliography

Major publications by the team in recent years

1E. Arian, A. Iollo.

Analytic Hessian Derivation for the quasi-one-dimensional Euler Equations, in: Journal of Computational Physics, 2009, vol. 228, n^o 2, pp. 476–490, doi:10.1016/j.jcp.2008.09.021.

http://hal.inria.fr/inria-00332853/en/
2M. Bergmann, C.-H. Bruneau, A. Iollo.

Enablers for robust POD models, in: Journal of Computational Physics, 2009, vol. 228, n^o 2, pp. 516–538, doi:10.1016/j.jcp.2008.09.024.

http://hal.inria.fr/inria-00338203/en/
3M. Bergmann, A. Iollo.

Modeling and simulation of fish like swimming, in: Journal of Computational Physics, 2011, vol. 230, n^o 2, pp. 329-348. [ DOI : 10.1016/j.jcp.2010.09.017 ]

http://hal.inria.fr/inria-00546330/en
4F. Billy, B. Ribba, O. Saut, H. Morre-Trouilhet, T. Colin, D. Bresch, J.-P. Boissel, E. Grenier, J.-P. Flandrois.

A pharmacologically based multiscale mathematical model of angiogenesis and its use in investigating the efficacy of a new cancer treatment strategy, in: Journal of Theoretical Biology, 2009, vol. 260, n^o 4, pp. 545-62.

http://hal.inria.fr/inria-00440447/en/
5D. Bresch, C. Choquet, L. Chupin, T. Colin, M. Gisclon.

Roughness-Induced Effect at Main order on the Reynolds Approximation, in: SIAM multiscale, 2010, To appear.

http://hal.archives-ouvertes.fr/hal-00385963/en/
6C.-H. Bruneau, F. Chantalat, C. Galusinski, A. Iollo.

Level-Set, Penalization and Cartesian Meshes: a Paradigm for Inverse Problems and Optimal Design, in: Journal of Computational Physics, 2009, vol. 228, n^o 17, pp. 6291–6315, doi:10.1016/j.jcp.2009.05.017.

http://hal.archives-ouvertes.fr/hal-00385460/en/
7I. Ciuperca, M. Jai, C. Poignard.

Approximate Transmission Conditions through a rough thin layer. The case of the periodic roughness, in: European Journal of Applied Mathematics, 2010, vol. 21, n^o 1, pp. 51-75.

http://hal.inria.fr/inria-00356124/en
8M. Colin, D. Lannes.

Short pulses approximation in dispersive media, in: SIAM Journal on Mathematical Analysis, 2009, vol. 41, n^o 2, pp. 708–732.

http://www.math.u-bordeaux.fr/~mcolin/liste-prepub.html
9E. Creusé, A. Giovannini, I. Mortazavi.

Vortex simulation of active control strategies for transitional backward-facing step flows, in: Computers and Fluids, 2009, vol. 38, n^o 7, pp. 1348–1360, doi: 10.1016/j.compfluid.2008.01.036.

http://www.math.u-bordeaux1.fr/~mortaz/
10J. Dambrine, P. Hoch, R. Kuate, J. Loheac, J. Metral, B. Rebourcet, L. Weynans.

Robust numerical schemes for anisotropic diffusion problems, a first step for turbulence modeling in Lagrangian hydrodynamics, in: ESAIM: Proceedings, 2009, vol. 28, pp. 80–99, doi: 10.1051/proc/2009040.

http://hal.inria.fr/inria-00443523/en/

Publications of the year

Doctoral Dissertations and Habilitation Theses

11M. Latige.

Simulation numérique de l'ablation liquide, Université Sciences et Technologies - Bordeaux I, September 2013.

http://hal.inria.fr/tel-00858600

Articles in International Peer-Reviewed Journals

12M. Bergmann, J. Hovnanian, A. Iollo.

An accurate cartesian method for incompressible flows with moving boundaries, in: Communications in Computational Physics, 2013.

http://hal.inria.fr/hal-00906897
13C.-H. Bruneau, F. Chantalat, A. Iollo, B. Jordi, I. Mortazavi.

Modelling and shape optimization of an actuator, in: Structural and Multidisciplinary Optimization, 2013, vol. 48, n^o 6, pp. 1143-1151.

http://hal.inria.fr/hal-00935693
14C.-H. Bruneau, E. Creusé, P. Gilliéron, I. Mortazavi.

A glimpse on passive control using porous media for incompressible aerodynamics, in: International Journal of Aerodynamics, 2014, vol. 4, n^o 1/2, pp. 70-86.

http://hal.inria.fr/hal-00922032
15T. Colin, M.-C. Durrieu, J. Joie, Y. Lei, Y. Mammeri, C. Poignard, O. Saut.

Modelling of the migration of endothelial cells on bioactive micropatterned polymers, in: Mathematical Biosciences and Engineering, August 2013, vol. 10, n^o 4, pp. 997-1015, Submitted. [ DOI : 10.3934/mbe.2013.10.997 ]

http://hal.inria.fr/hal-00709993
16M. Dauge, P. Dular, L. Krähenbühl, V. Péron, R. Perrussel, C. Poignard.

Corner asymptotics of the magnetic potential in the eddy-current model, in: Mathematical Methods in the Applied Sciences, August 2013. [ DOI : 10.1002/mma.2947 ]

http://hal.inria.fr/hal-00779067
17M. Duruflé, V. Péron, C. Poignard.

Thin Layer Models For Electromagnetism, in: Communications in Computational Physics, 2014, in print.

http://hal.inria.fr/hal-00918634
18C. Guillope, L. J. Bona, T. Colin.

Propagation of long-crested water waves, in: Discrete and Continuous Dynamical Systems - Series A, February 2013, vol. 33, n^o 2, pp. 599-628.

http://hal.inria.fr/hal-00803947
19N. James, E. Maitre, I. Mortazavi.

Immersed boundary methods for the numerical simulation of incompressible aerodynamic and fluid-structure interactions, in: Annales mathématiques Blaise Pascal, 2013, vol. 20, n^o 1, pp. 139-173. [ DOI : 10.5802/ambp.324 ]

http://hal.inria.fr/hal-00741217
20T. Meuel, Y. L. Xiong, P. Fischer, C.-H. Bruneau, M. Bessafi, H. Kellay.

Intensity of vortices: From soap bubbles to hurricanes, in: Scientific Reports, 2013, vol. 3, n^o 3455.

http://hal.inria.fr/hal-00935695
21R. Perrussel, C. Poignard.

Asymptotic Expansion of Steady-State Potential in a High Contrast Medium with a Thin Resistive Layer, in: Applied Mathematics and Computation, September 2013, vol. 221, pp. 48-65. [ DOI : 10.1016/j.amc.2013.06.047 ]

http://hal.inria.fr/inria-00442659
22K. Santugini-Repiquet.

Homogenization at different linear scales, bounded martingales and the Two-Scale Shuffle limit, in: ESAIM: Control, Optimisation and Calculus of Variations, October 2013, vol. 19, pp. 931–946. [ DOI : 10.1051/cocv/2012039. ]

http://hal.inria.fr/hal-00621265
23Y. L. Xiong, C.-H. Bruneau, H. Kellay.

A numerical study of two dimensional flows past a bluff body for dilute polymer solutions, in: J. Non-Newtonian Fluid Mech., 2013.

http://hal.inria.fr/hal-00765270
24Y. L. Xiong, C.-H. Bruneau, H. Kellay.

A numerical study of two dimensional flows past a bluff body for dilute polymer solutions, in: Journal of Non-Newtonian Fluid Mechanics, 2013, vol. 196, pp. 8-26.

http://hal.inria.fr/hal-00935690

Invited Conferences

25M. Dauge, P. Dular, L. Krähenbühl, V. Péron, R. Perrussel, C. Poignard.

Corner Asymptotics of the Magnetic Potential in the Eddy-Current Model, in: JSA - Journées Singulières Augmentées, Rennes, France, 2013.

http://hal.inria.fr/hal-00931735

International Conferences with Proceedings

26S. Benzekry, N. André, A. Benabdallah, J. Ciccolini, C. Faivre, F. Hubert, D. Barbolosi.

A mathematical mode for growing metastases on oncologist's service, in: 3rd Annual International Conference in Computational Surgery, houston, United States, M. Garbey, B. L. Bass, S. Bercelli, C. Collet, P. Cerveri (editors), 2013.

http://hal.inria.fr/hal-00839331
27M. Bergmann, A. Iollo, R. Mittal.

Influence of caudal fin elasticity on swimmer propulsion, in: 2nd Symposium on Fluid-Structure-Sound Interactions and Control, Hong-Kong / Macau, Hong Kong, 2013.

http://hal.inria.fr/hal-00906927
28M. Bergmann, A. Iollo, R. Mittal.

Influence of caudal fin rigidity on swimmer propulsion efficiency, in: Joint EUROMECH / ERCOFTAC Colloquium 549 "Immersed Boundary Methods: Current Status and Future Research Directions", Leiden, Netherlands, 2013.

http://hal.inria.fr/hal-00906931
29L. Fadiga, C. Farges, J. Sabatier, K. Santugini-Repiquet.

Hinfinity output feedback control of commensurate fractional order systems, in: European Control Conference (ECC), Zurich, Switzerland, July 2013.

http://hal.inria.fr/hal-00838790
30M. Gander, L. Halpern, K. Santugini-Repiquet.

Non shape regular domain decompositions: an analysis using a stable decomposition in $H_0 ⌃ 1$ , in: 20th International Conference on Domain Decomposition Methods, La Jolla, United States, R. Bank, M. Holst, O. Widlund, J. Xu (editors), Lecture Notes in Computational Science and Engineering, Springer, July 2013, vol. 91, pp. 485–492. [ DOI : 10.1007/978-3-642-35275-1_57 ]

http://hal.inria.fr/hal-00607043
31Y. L. Xiong, P. Fischer, C.-H. Bruneau.

Numerical simulations of two-dimensional turbulent thermal convection on the surface of a soap bubble, in: 7th ICCFD, Hawaï, United States, Springer, 2013.

http://hal.inria.fr/hal-00765297

Conferences without Proceedings

32F. Bernard, A. Iollo, G. Puppo.

A second order cartesian scheme for BGK equation, in: 2nd ECCOMAS Young Investigators Conference (YIC 2013), Bordeaux, France, September 2013.

http://hal.inria.fr/hal-00855885
33T. Milcent, A. Iollo.

Lagrangian sharp interface schemes for multimaterials, in: 2nd ECCOMAS Young Investigators Conference (YIC 2013), Bordeaux, France, September 2013.

http://hal.inria.fr/hal-00855870
34A. de Brauer, Y. Gorsse, A. Iollo, T. Milcent.

Modeling and simulation of compressible multi-material interface instabilities, in: 2nd ECCOMAS Young Investigators Conference (YIC 2013), Bordeaux, France, September 2013.

http://hal.inria.fr/hal-00855881

Scientific Books (or Scientific Book chapters)

35M. Bergmann, T. Colin, A. Iollo, D. Lombardi, O. Saut, H. Telib.

Reduced Order Models at work, in: Modeling, Simulation and Applications, A. Quarteroni (editor), Springer, 2013, vol. 9.

http://hal.inria.fr/hal-00906908

Internal Reports

36S. Bellec, M. Colin, M. Ricchiuto.

Sur des Modèles Asymptotiques en Océanographie, Inria, September 2013, n^o RR-8361.

http://hal.inria.fr/hal-00860438
37J. Joie, Y. Lei, T. Colin, M.-C. Durrieu, C. Poignard, O. Saut.

Modelling of migration and orientation of endothelial cells on micropatterned polymers, Inria, 2013, n^o RR-8252.

http://hal.inria.fr/hal-00795238
38M. Leguèbe, C. Poignard, L. Weynans.

A second-order Cartesian method for the simulation of electropermeabilization cell models, Inria, May 2013, n^o RR-8302, 35 p.

http://hal.inria.fr/hal-00821758
39K. Santugini-Repiquet.

A Discontinuous Galerkin like Coarse Space correction for Domain Decomposition Methods with continuous local spaces : the DCS-DGLC Algorithm, September 2013.

http://hal.inria.fr/hal-00867394

Other Publications

40S. Benzekry, A. Gandolfi, P. Hahnfeldt.

A mathematical model of systemic inhibition of angiogenesis in metastatic development, September 2013.

http://hal.inria.fr/hal-00867992
41S. Benzekry, A. Gandolfi, P. Hahnfeldt.

Global Dormancy of Metastases due to Systemic Inhibition of Angiogenesis, December 2013.

http://hal.inria.fr/hal-00868592
42S. Benzekry, C. Lamont, A. Beheshti, L. Haltky, P. Hahnfeldt.

Classical Mathematical Models for Description and Forecast of Preclinical Tumor Growth, December 2013.

http://hal.inria.fr/hal-00922553
43G. Ravon, Y. Coudière, A. Iollo, O. Bernus.

3D Source Location in Optical Mapping, in: Workshop Liryc, Pessac, France, October 2013, Workshop Liryc.

http://hal.inria.fr/hal-00925812
44K. Santugini-Repiquet.

A Discontinuous Coarse Spaces (DCS) Algorithm for Cell Centered Finite Volumes based Domain Decomposition Methods: the DCS-RJMin algorithm, 2014.

http://hal.inria.fr/hal-00929807

References in notes

45D. Ambrosi, L. Preziosi.

On the closure of mass balance models for tumor growth, in: Mathematical Models and Methods in Applied Sciences, 2002, vol. 12, pp. 737–754.
46P. Angot, C.-H. Bruneau, P. Fabrie.

A penalization method to take into account obstacles in an incompressible flow, in: Num. Math., 1999, vol. 81, n^o 4, pp. 497–520.
47S. Benito.

Modélisation et simulation du comportement mécanique des milieux plastiques mous : mousses liquides et émulsions, École doctorale de Mathématiques et d'informatique de Bordeaux, Nov. 2009.
48C.-H. Bruneau, D. Depeyras, P. Gillieron, I. Mortazavi.

Passive and active control around Ahmed Body, in: EDRFCM, France, 2008.

http://hal.archives-ouvertes.fr/hal-00282806/en/
49C.-H. Bruneau, P. Gillieron, I. Mortazavi.

Passive control around the two dimensional square back Ahmed body using porous devices, in: Journal of Fluids Engineering, 2008, vol. 130, n^o 6, doi: 10.1115/1.2917423.

http://hal.archives-ouvertes.fr/hal-00282111/en/
50C.-H. Bruneau, I. Mortazavi.

Passive control of bluff body flows using porous media, in: Int. J. for Num. Meth. in Fluids, 2004, vol. 56.
51C.-H. Bruneau, I. Mortazavi.

Control of vortex shedding around a pipe section using a porous sheet, in: Int. J. Offshore and Polar Eng., 2006, vol. 16, n^o 2.
52C.-H. Bruneau, I. Mortazavi.

Numerical modelling and passive flow control using porous media, in: Computers and Fluids, 2008, vol. 37, n^o 5, pp. 488–498, doi:10.1016/j.compfluid.2007.07.001.

http://hal.archives-ouvertes.fr/hal-00282126/en/
53C.-H. Bruneau, I. Mortazavi.

Numerical Modelling of Porous-Fluid Flows Using the Penalisation Method, in: Scaling Up and Modeling for Transport and Flow in Porous Media, Dubrovnik, Croatia, 2008.

http://www.math.u-bordeaux1.fr/~mortaz/
54C.-H. Bruneau, M. Saad.

The 2D lid-driven cavity problem revisited, in: Computers & Fluids, 2006, vol. 35, n^o 3.
55A. Bunyakin, S. Chernyshenko, G. Stepanov.

Inviscid Batchelor-model flow past an aerofoil with a vortex trapped in a cavity, in: J. Fluid Mech., 1996, vol. 323, pp. 367–376.
56F. Buret, N. Faure, L. Nicolas, R. Perrussel, C. Poignard.

Numerical studies on the effect of electric pulses on an egg-shaped cell with a spherical nucleus, Inria, April 2010, n^o RR-7270, 21 p.

http://hal.inria.fr/inria-00477495/en
57F. Chantalat, C.-H. Bruneau, C. Galusinski, A. Iollo.

Level-Set and Adjoint-Based Optimization Methods For Inverse Problems, in: 6th International Congress on Industrial and Applied Mathematics, 2007.
58R. Chassagne.

Modélisation des processus biogéochimiques dans les sédiments variablement saturés soumis au forccage de la marée, École doctorale des sciences et environnements, Spécialité : Biogéochimie et Ecosystèmes, université Bordeaux 1, Oct. 2010.
59N. Cindea, B. Fabrèges, F. De Gournay, C. Poignard.

Optimal placement of electrodes in an electroporation process, in: ESAIM: Proceedings, August 2010, vol. 30.

http://hal.inria.fr/inria-00544874/en
60M. Colin, T. Colin, K. Santugini-Repiquet.

Rheologic modelization of a mixed nanotube-polymer fluid, in: Conference in honour of E. Hairer's 60th birthday, Geneva, Switzerland, JUNE 2009.

http://www.unige.ch/math/hairer60/index.php?page=abstr&nom=KevinSantugini
61G.-H. Cottet, B. Michaux, S. Ossia, G. VanderLinden.

A comparison of spectral and vortex methods in three-dimensional incompressible flows, in: J. Comp. Phys., 2002, vol. 175.
62J. Dambrine.

Etude du mélange de fluides complexes en microcanaux, École doctorale de Mathématiques et d'informatique de Bordeaux, Dec. 2009.
63D. Depeyras.

Contrôles actifs et passifs appliqués à l'aérodynamique automobile, École doctorale de Mathématiques et d'informatique de Bordeaux, Nov. 2009.

http://ori-oai.u-bordeaux1.fr/pdf/2009/DEPEYRAS_DELPHINE_2009.pdf
64P. Fischer, C.-H. Bruneau, H. Kellay.

Multiresolution analysis for 2D turbulence. Part 2: a physical interpretation, in: Discr. Cont. Dyn. Systems - série B, 2007, vol. 7, n^o 4.
65B. Galletti, C.-H. Bruneau, L. Zannetti, A. Iollo.

Low-order modelling of laminar flow regimes past a confined square cylinder, in: J. Fluid Mech., 2004, vol. 503, pp. 161–170.
66C. Galusinski, P. Vigneaux.

Level set method and stability condition for curvature-driven flows, in: CRAS, 2007, submitted.
67H. Greenspan.

Models for the Growth of a Solid Tumor by diffusion, in: Stud Appl Math, 1972, vol. 4, n^o LI, pp. 317–340.
68H. Greenspan.

On the growth and stability of cell cultures and solid tumors, in: J Theor Biol, 1976, vol. 56, pp. 229–242.
69P. Holmes, J. L. Lumley, G. Berkooz.

Turbulence, Coherent Structures, Dynamical Systems and Symmetry, Cambridge Monographs on Mechanics, 1996.
70A. Iollo, M. Ferlauto, L. Zannetti.

An aerodynamic optimization method based on the inverse problem adjoint equations, in: Journal of Computational Physics, 2001, vol. 173, n^o 1.
71L. Mir, F. Glass, G. Sersa, J. Teissié, C. Domenge, D. Miklavcic, M. Jaroszeski, S. Orlowski, D. Reintgen, Z. Rudolf, M. Belehradek, R. Gilbert, M. Rols, J. Belehradek, J. Bachaud, R. DeConti, B. Stabuc, P. Coninx, M. Cemazar, R. Heller.

Effective treatment of cutaneous and subcutaneous malignant tumors by electrochemotherapy, in: Br. J. of Cancer, 1998, vol. 77, pp. 2336–2342.
72I. Mortazavi, G.-H. Cottet, F. Gallizio, A. Magni.

A vortex immersed boundary method for bluff-body flows, in: ASME Summer meeting - Symposium on Development and Applications of Immersed Boundary Methods, Canada Montreal, ASME, 2010.

http://hal.inria.fr/inria-00554395/en
73I. Mortazavi.

Numerical simulation of active and passive control strategies for vortex flows, in: Second workshop on the flow control and reduced order models, France TOULOUSE, C. Airiau & J.P. Raymond, 2008.

http://hal.inria.fr/inria-00346981/en/
74G. Ottino.

Two approaches to the study of detached flows, École doctorale de Mathématiques et d'informatique de Bordeaux, Apr. 2009.

http://ori-oai.u-bordeaux1.fr/pdf/2009/OTTINO_GABRIELE_2009.pdf
75V. Péron, C. Poignard.

Approximate transmission conditions for time-harmonic Maxwell equations in a domain with thin layer, Inria, 2008, 37 p, RR-6775.

http://hal.inria.fr/inria-00347971/en/
76B. Ribba, T. Colin, S. Schnell.

A multi-scale mathematical model of cancer growth and radiotherapy efficacy: The role of cell cycle regulation in response to irradiation, in: Theoretical Biology and Medical Modeling, 2006, vol. 3, n^o 7.
77B. Ribba, O. Saut, T. Colin, D. Bresch, E. Grenier, J.-P. Boissel.

A multiscale mathematical model of avascular tumor growth to investigate the therapeutic benefit of anti-invasive agents, in: Journal of Theoretical Biology, 2006, vol. 243, pp. 532–541.
78S. Tancogne.

Calcul numérique et Stabilité d'écoulements diphasiques tridimensionnels en Microfluidique, École doctorale de Mathématiques et d'informatique de Bordeaux, Dec. 2007.
79H. Telib, A. Iollo, L. Zannetti.

Modeling and optimization of a propeller by means of inverse problems, in: Third international Conference in Inverse Problems: Modeling and Simulation, Oludeniz (Fethiye, Mugla), 2006, May 29 - June 02, Turkey.
80D. Venturi, G. E. Karniadakis.

Gappy data and reconstruction procedures for flow past a cylinder, in: J. Fluid Mech., 2004, vol. 519, pp. 315–336.
81P. Vigneaux.

Méthodes Level Set pour des problèmes d'interface en microfluidique, Université Bordeaux 1, École doctorale de Mathématiques et d'informatique de Bordeaux, Dec. 2007.
82J. Weller.

Réduction de modèle par identification de système et application au contrôle du sillage d'un cylindre, École doctorale de Mathématiques et d'informatique de Bordeaux, Jan. 2009.

http://ori-oai.u-bordeaux1.fr/pdf/2009/WELLER_JESSIE_2009.pdf
83C. Wervaecke.

Simulation d'écoulements turbulents compressibles par une méthode éléments finis stabilisée, École doctorale de Mathématiques appliquées et calcul scientifique, Université Bordeaux 1, Dec. 2010.
84K. E. Willcox.

Unsteady flow sensing and estimation via the gappy proper orthogonal decomposition, in: Computers and Fluids, 2006, vol. 35.
85Y. L. Xiang.

Analyse par simulation numérique de la réduction de la trainée et des caractéristiques d'écoulements bidimensionnels par l'ajout de polymères en solution, École doctorale de Mathématiques appliquées et calcul scientifique, Université Bordeaux 1, Dec. 2010.

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