Section: Dissemination
Promoting Scientific Activities
Scientific Events Organisation
General Chair, Scientific Chair
Scientific Events Selection
Chair of Conference Program Committees
Member of the Conference Program Committees
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BIBM 2016: IEEE International Conference on Bioinformatics and Biomedicine [D. Lavenier]
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BIOKDD 2016: 15th International Workshop on Data Mining in Bioinformatics [D. Lavenier]
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ACM PASC16 Conference : Platform for Advanced Scientific Computing [D. Lavenier]
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RECOMB 2016 : International Conference on Research in Computational Molecular Biology [D. Lavenier]
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ECCB 2016 : 15th European Conference on Computational Biology [P. Peterlongo]
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SeqBio 2016 : Bioinformatics multidisciplinary workshop [P. Peterlongo]
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WACEBI 2016 : Workshop on Accelerator-Enabled Algorithms and Applications in Bioinformatics [D. Lavenier]
Reviewer
Journal
Reviewer - Reviewing Activities
Invited Talks
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D. Lavenier, Parallel Processing of Sequencing Data, Conférence d’informatique en Parallélisme, Architecture et Système, Lorient, France, July 2016
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D. Lavenier GATB: A Genomic Analysis Tool Box for designing parallel and low memory fingerprint bioinformatics software, Pasteur Institut, Paris, France, Sep. 2016.
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D. Lavenier, Low memory fingerprint data structure for genomics, ENS Rennes, France, oct. 2016.
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D. Lavenier GATB: A Genome Analysis Tool Box for designing parallel and low memory footprint bioinformatics software, Workshop on Emerging Bioinformatics Applications for Microbial Ecogenomics, Brest, France, oct. 2016.
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C. Lemaitre, Comparing numerous metagenomics datasets, Laboratoire de Biométrie et Biologie Évolutive, Lyon, France, Nov. 2016.
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P. Peterlongo De novo comparison of (large number of) metagenomic samples, Metagenomics day, Billile, Lille, France June 2016.
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P. Peterlongo Finding SNPs de novo from reads , Bioadvection workshop, Napoli, Italy, June 2016.
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P. Peterlongo De novo comparison of (large number of) metagenomic samples, What are the technical challenges? what can we expect from this?, RCAM workshop - keynote speaker, The Hague, Netherlands, September 2016.
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P. Peterlongo Multiple Comparative Metagenomics using Multiset k-mer Counting, Pasteur Summer School 2016 In Metagenomics, September 2016.
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C. Lemaitre Comparaison (massive) de (nombreux) metagénomes. Passons par les kmers pour passer à l’échelle, Journée scientifique sur "le Microbiome" organisée par Biogenouest, Rennes, France, December 2016.
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F. Legeai Les analyses bioinformatiques pour les données épigénomiques, Atelier ChIP du réseau REacTION, Paris, France, December 2016.
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R. Andonov, Global Optimization Methods for Genome Scaffolding and Completing Genome Assemblies, Workshop on Graph Assembly Algorithms for omics data, Univ. Milano-Bicocca, Italy, November 18, 2016
Leadership within the Scientific Community
Scientific Expertise
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Expert for the MEI (International Expertise Mission), French Research Ministry [D. Lavenier]
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Member of the Scientific Council of BioGenOuest [D. Lavenier]
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Member of the Scientific Council of the Computational Biology Institute of Montpellier [D. Lavenier]
Research and Pedagogical Administration
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Member of the local Inria Rennes CDT (Technologic Transfer Commission) [D. Lavenier]
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Member of the steering committee of the INRA BIPAA Platform (BioInformatics Platform for Agro-ecosystems Arthropods) [D. Lavenier]
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Member of the steering committee of The GenOuest Platform (Bioinformatics Platform of BioGenOuest) [D. Lavenier]
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Representative of the environnemental axis of UMR IRISA [C. Lemaitre]
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Organisation of the weekly seminar "Symbiose" [P. Peterlongo]
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Scientific Responsible for International Relationships at ISTIC [A. Mucherino]
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Member of "Commission Affaires Internationales" at University of Rennes 1 [A. Mucherino]
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In charge of the bachelor's degree in the computer science department of University of Rennes 1 (90 students) [R. Andonov]