EN FR
EN FR


previous Previous | up Home


Bibliography

Publications of the year

Doctoral Dissertations and Habilitation Theses

  • 1L. M. Barbarroux.

    Contributions to the multiscale modeling of the CD8 immune response : design, analysis, simulation and calibration of mathematical models, Université de Lyon, July 2017.

    https://hal.archives-ouvertes.fr/tel-01569442
  • 2S. Bernard.

    Structured differential equations and multiscale approaches for human cell population dynamics, Université Claude Bernard Lyon 1, June 2017, Habilitation à diriger des recherches.

    https://hal.archives-ouvertes.fr/tel-01572434
  • 3A. Besse.

    Mathematical Modeling of Chronic Myelogenous Leukemia, Université de Lyon, July 2017.

    https://hal.archives-ouvertes.fr/tel-01561249
  • 4A. Bouchnita.

    Mathematical modelling of blood coagulation and thrombus formation under flow in normal and pathological conditions, Université Lyon 1 - Claude Bernard ; Ecole Mohammadia d'Ingénieurs - Université Mohammed V de Rabat - Maroc, December 2017.

    https://hal.archives-ouvertes.fr/tel-01672317
  • 5T. Lepoutre.

    Contributions en dynamique de populations, Université Claude Bernard (Lyon 1), April 2017, Habilitation à diriger des recherches.

    https://hal.inria.fr/tel-01524261

Articles in International Peer-Reviewed Journals

  • 6M. Adimy, A. Chekroun, B. Kazmierczak.

    Traveling waves in a coupled reaction-diffusion and difference model of hematopoiesis, in: Journal of Differential Equations, 2017, vol. 262, pp. 4085 - 4128. [ DOI : 10.1016/j.jde.2016.12.009 ]

    https://hal.inria.fr/hal-01573613
  • 7M. Adimy, A. Chekroun, T. Kuniya.

    Delayed nonlocal reaction–diffusion model for hematopoietic stem cell dynamics with Dirichlet boundary conditions, in: Mathematical Modelling of Natural Phenomena, 2017, vol. 12, no 6, pp. 1 - 22. [ DOI : 10.1051/mmnp/2017078 ]

    https://hal.inria.fr/hal-01683636
  • 8O. Angulo, F. Crauste, J. López-Marcos.

    Numerical integration of an erythropoiesis model with explicit growth factor dynamics, in: Journal of Computational and Applied Mathematics, March 2018, vol. 330, pp. 770 - 782. [ DOI : 10.1016/j.cam.2017.01.033 ]

    https://hal.inria.fr/hal-01646786
  • 9O. Angulo, O. Gandrillon, F. Crauste.

    Investigating the role of the experimental protocol in phenylhydrazine-induced anemia on mice recovery, in: Journal of Theoretical Biology, January 2018, vol. 437, pp. 286 - 298. [ DOI : 10.1016/j.jtbi.2017.10.031 ]

    https://hal.inria.fr/hal-01646792
  • 10C.-A. Azencott, T. Aittokallio, S. Roy, A. Agrawal, E. Barillot, N. Bessonov, D. Chasman, U. Czerwinska, A. F. Siahpirani, S. Friend, A. Goldenberg, J. Greenberg, M. Huber, S. Kaski, C. Kurz, M. Mailick, M. Merzenich, M. Morozova, A. Movaghar, M. Nahum, T. E. M. Nordling, T. Norman, R. Penner, K. Saha, A. Salim, S. Sorooshyari, V. Soumelis, A. Stark-Inbar, A. Sterling, G. Stolovitzky, S. S. Shiju, J. Tang, A. Tosenberger, T. Vieet Van, K. Wennerberg, A. Zinovyev.

    The inconvenience of data of convenience: computational research beyond post-mortem analyses, in: Nature Methods, September 2017, vol. 14, no 10, pp. 937 - 938. [ DOI : 10.1038/nmeth.4457 ]

    https://hal.archives-ouvertes.fr/hal-01679028
  • 11A. Besse, G. D. Clapp, S. Bernard, F. E. Nicolini, D. Levy, T. Lepoutre.

    Stability Analysis of a Model of Interaction Between the Immune System and Cancer Cells in Chronic Myelogenous Leukemia, in: Bulletin of Mathematical Biology, 2017, pp. 1–27. [ DOI : 10.1007/s11538-017-0272-7 ]

    https://hal.archives-ouvertes.fr/hal-01539364
  • 12A. Besse, T. Lepoutre, S. Bernard.

    Long-term treatment effects in chronic myeloid leukemia, in: Journal of Mathematical Biology, 2017, pp. 1-26. [ DOI : 10.1007/s00285-017-1098-5 ]

    https://hal.archives-ouvertes.fr/hal-01447781
  • 13G. Bocharov, A. Meyerhans, N. Bessonov, S. Trofimchuk, V. Volpert.

    Modelling the dynamics of virus infection and immune response in space and time, in: International Journal of Parallel, Emergent and Distributed Systems, August 2017. [ DOI : 10.1080/17445760.2017.1363203 ]

    https://hal.archives-ouvertes.fr/hal-01578907
  • 14A. Bouchnita, F. E. Belmaati, R. Aboulaich, M. J. K. Koury, V. A. Volpert.

    A Hybrid Computation Model to Describe the Progression of Multiple Myeloma and Its Intra-Clonal Heterogeneity, in: MDPI - Computation, 2017, vol. 5, no 1, 16 p. [ DOI : 10.3390/computation5010016 ]

    https://hal.archives-ouvertes.fr/hal-01565940
  • 15A. Bouchnita, G. Bocharov, A. Meyerhans, V. Volpert.

    Towards a Multiscale Model of Acute HIV Infection, in: Computation, 2017, vol. 5, no 1, 6 p. [ DOI : 10.3390/computation5010006 ]

    https://hal.archives-ouvertes.fr/hal-01570577
  • 16A. Bouchnita, T. Galochkina, P. Kurbatova, P. Nony, V. Volpert.

    Conditions of microvessel occlusion for blood coagulation in flow, in: International Journal for Numerical Methods in Biomedical Engineering, 2017. [ DOI : 10.1002/cnm.2850 ]

    https://hal.archives-ouvertes.fr/hal-01573775
  • 17F. Crauste, J. Mafille, L. Boucinha, S. Djebali, O. Gandrillon, J. Marvel, C. Arpin.

    Identification of Nascent Memory CD8 T Cells and Modeling of Their Ontogeny, in: Cell Systems, February 2017, vol. 4, no 3, pp. 306-317. [ DOI : 10.1016/j.cels.2017.01.014 ]

    https://hal.inria.fr/hal-01409637
  • 18R. El Cheikh, S. Bernard, N. El Khatib.

    A multiscale modelling approach for the regulation of the cell cycle by the circadian clock, in: Journal of Theoretical Biology, 2017, vol. 426, pp. 117-125. [ DOI : 10.1016/j.jtbi.2017.05.021 ]

    https://hal.archives-ouvertes.fr/hal-01561617
  • 19N. Eymard, V. Volpert, P. Kurbatova, N. Bessonov, K. Ogungbenro, L. Aarons, P. Janiaud, P. Nony, A. Bajard, S. Chabaud, Y. Bertrand, B. Kassaï, C. Cornu.

    Mathematical model of T-cell lymphoblastic lymphoma: disease, treatment, cure or relapse of a virtual cohort of patients, in: Mathematical Medicine and Biology, 2017. [ DOI : 10.1093/imammb/dqw019 ]

    https://hal.archives-ouvertes.fr/hal-01568372
  • 20T. Galochkina, A. Bouchnita, P. Kurbatova, V. Volpert.

    Reaction-diffusion waves of blood coagulation, in: Mathematical Biosciences, 2017, vol. 288, pp. 130 - 139. [ DOI : 10.1016/j.mbs.2017.03.008 ]

    https://hal.archives-ouvertes.fr/hal-01567320
  • 21U. Herbach, A. Bonnaffoux, T. Espinasse, O. Gandrillon.

    Inferring gene regulatory networks from single-cell data: a mechanistic approach, in: BMC Systems Biology, November 2017, vol. 11, no 1, 105 p. [ DOI : 10.1186/s12918-017-0487-0 ]

    https://hal.archives-ouvertes.fr/hal-01646910
  • 22M. Marion, V. Volpert.

    Existence of Pulses for the System of Competition of Species, in: Journal of Dynamics and Differential Equations, 2017, vol. 14, pp. 1–18. [ DOI : 10.1007/s10884-017-9582-6 ]

    https://hal.archives-ouvertes.fr/hal-01573773
  • 23P. Mazzocco, S. Bernard, L. Pujo-Menjouet.

    Estimates and impact of lymphocyte division parameters from CFSE data using mathematical modelling, in: PLoS ONE, June 2017, vol. 12, no 6, e0179768 p.

    https://hal.archives-ouvertes.fr/hal-01561667
  • 24S. Pereira, L. Bodgi, M. Duclos, A. Canet, M. L. Ferlazzo, C. Devic, A. Granzotto, S. Deneuve, G. Vogin, N. Foray.

    Fast and binary assay for predicting radiosensitivity based on the nucleoshuttling of ATM protein: development, validation and performances, in: International Journal of Radiation Oncology - Biology - Physics, October 2017. [ DOI : 10.1016/j.ijrobp.2017.10.029 ]

    https://hal.inria.fr/hal-01647135
  • 25P. Réu, A. Khosravi, S. Bernard, J. E. Mold, M. Salehpour, K. Alkass, S. Perl, J. Tisdale, G. Possnert, H. Druid, J. Frisén.

    The Lifespan and Turnover of Microglia in the Human Brain, in: Cell Reports , July 2017, vol. 20, no 4, pp. 779 - 784. [ DOI : 10.1016/j.celrep.2017.07.004 ]

    https://hal.archives-ouvertes.fr/hal-01572438
  • 26K. L. Spalding, S. Bernard, E. Näslund, M. Salehpour, G. Possnert, L. L. Appelsved, K.-Y. Fu, K. Alkass, H. Druid, A. Thorell, M. Rydén, P. Arner.

    Impact of fat mass and distribution on lipid turnover in human adipose tissue, in: Nature Communications, May 2017, vol. 8, 15253 p. [ DOI : 10.1038/ncomms15253 ]

    https://hal.archives-ouvertes.fr/hal-01561605
  • 27V. Volpert, S. Petrovskii, A. Zincenko.

    Interaction of human migration and wealth distribution, in: Nonlinear Analysis: Hybrid Systems, 2017, vol. 159, pp. 408 - 423. [ DOI : 10.1016/j.na.2017.02.024 ]

    https://hal.archives-ouvertes.fr/hal-01565519
  • 28V. Vougalter, V. Volpert.

    Existence of stationary solutions for some systems of integro-differential equations with superdiffusion, in: Rocky Mountain Journal of Mathematics, 2017, vol. 47, no 3, pp. 955-970. [ DOI : 10.1216/RMJ-2017-47-3-955 ]

    https://hal.archives-ouvertes.fr/hal-01564763
  • 29V. Vougalter, V. Volpert.

    Solvability in the sense of sequences for some non Fredholm operators related to the superdiffusion, in: Journal of Pseudo-Differential Operators and Applications, 2017, vol. 160, pp. 1–22. [ DOI : 10.1007/s11868-017-0204-1 ]

    https://hal.archives-ouvertes.fr/hal-01573772
  • 30C. Yang, L. M. Tine.

    A Hybrid Finite Volume Method for Advection Equations and Its Applications in Population Dynamics, in: Numerical Methods for Partial Differential Equations, February 2017, vol. 33, no 4, pp. 1114 - 1142. [ DOI : 10.1002/num.22134 ]

    https://hal.archives-ouvertes.fr/hal-01646859

Other Publications

References in notes
  • 34G. D. Clapp, T. Lepoutre, R. El Cheikh, S. Bernard, J. Ruby, H. Labussière-Wallet, F. E. Nicolini, D. Levy.

    Implication of the Autologous Immune System in BCR-ABL Transcript Variations in Chronic Myelogenous Leukemia Patients Treated with Imatinib., in: Cancer Research, October 2015, vol. 75, no 19, pp. 4053-62. [ DOI : 10.1158/0008-5472.CAN-15-0611 ]

    https://hal.inria.fr/hal-01251396
  • 35B. Després, F. Lagoutière.

    Un schéma non linéaire anti-dissipatif pour l'équation d'advection linéaire, in: Comptes Rendus de l'Académie des Sciences - Series I - Mathematics, 1999, vol. 328, no 10, pp. 939 - 943. [ DOI : 10.1016/S0764-4442(99)80301-2 ]

    http://www.sciencedirect.com/science/article/pii/S0764444299803012
  • 36T. Goudon, F. Lagoutiére, L. M. Tine.

    Simulations of the Lifshitz-Slyozov equations: The role of coagulation terms in the asymptotic behavior, in: Mathematical Models and Methods in Applied Sciences, 2013, vol. 23, no 07, pp. 1177-1215.

    http://www.worldscientific.com/doi/abs/10.1142/S0218202513500061
  • 37G.-S. Jiang, C.-W. Shu.

    Efficient Implementation of Weighted ENO Schemes, in: Journal of Computational Physics, 1996, vol. 126, no 1, pp. 202 - 228. [ DOI : 10.1006/jcph.1996.0130 ]

    http://www.sciencedirect.com/science/article/pii/S0021999196901308
  • 38I. Roeder, M. Horn, I. Glauche, A. Hochhaus, M. C. Mueller, M. Loeffler.

    Dynamic modeling of imatinib-treated chronic myeloid leukemia: functional insights and clinical implications, in: Nature Medicine, 10 2006, vol. 12, pp. 1181 EP -.

    http://dx.doi.org/10.1038/nm1487


previous Previous | up Home