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Section: Dissemination

Promoting Scientific Activities

Scientific events organisation

Member of organizing committees
Table 11.
IBIS members Conference, workshop, school Date
Hidde de Jong CompSysBio: Advanced Lecture Course on Computational Systems Biology, Aussois Apr 2019
Aline Marguet Biohasard: Stochastic models for biology, Grenoble Jun 2020
Delphine Ropers Séminaire de Modélisation du Vivant (SeMoVi), Lyon and Grenoble 2019

Scientific events selection

Chair of conference program committees
Table 12.
IBIS member Conference, workshop, school Role
Eugenio Cinquemani European Control Conference (ECC 2019 and 2020) Associate editor

Member of conference program committees
Table 13.
IBIS member Conference, workshop, program
Eugenio Cinquemani ECC 2019 and 2020, CMSB 2018 and 2019, HSB 2019 and 2020, SASB 2019, IEEE CIBCB 2019
Hidde de Jong CMSB 2019, FOSBE 2019, HSB 2019 and 2020
Delphine Ropers CSBio 2019

Journal

Member of editorial boards
Table 14.
IBIS member Journal
Johannes Geiselmann Frontiers in Microbiology (review editor)
Hidde de Jong Journal of Mathematical Biology
Hidde de Jong Biosystems (reviews editor)
Hidde de Jong ACM/IEEE Transactions on Computational Biology and Bioinformatics

Scientific evaluation and expertise

Table 15.
IBIS member Organism Role
Johannes Geiselmann INRA Member scientific advisory committee Microbiologie, Adaptation, Pathogénie
Johannes Geiselmann UMR5240 CNRS-UCBL-INSA-BayerCropScience Member scientific council
Hidde de Jong Microbiology and Food Chain Department, Inra Member scientific council
Hidde de Jong Univ Grenoble Alpes Member scientific council of Pôle MSTIC
Hidde de Jong International Human Frontier Science Program (HFSP) Member grant selection committee
Delphine Ropers INRA-Inria Member selection committee PhD grants
Delphine Ropers Elixir Member of Microbial Biotechnology Community

Invited talks and other presentations

Eugenio Cinquemani

Table 16.
Title Event and location Date
Estimation and control of microbial dynamics: From single-cell to microbial communities Presentation at Inria-KAIST workshop on Applied mathematics, Paris Mar 2019
Optimal control of bacterial growth for metabolite production: The role of timing and costs of control Presentation at ECC 2019, Naples (Italy) Jun 2019
Enhanced production of heterologous proteins by a synthetic microbial consortium: Conditions and tradeoffs Invited talk at Workshop Advanced Physics for Medicine, CNR, Rome (Italy) Sep 2019

Hidde de Jong

Table 17.
Title Event and location Date
Integrated models of the cell: metabolism, gene expression, signalling Tutorial at CompSysBio: Advanced Lecture Course on Computational Systems Biology, Aussois Apr 2019
Optimal control of bacterial growth: biotechnological applications Invited talk at Workshop New Vistas in Computational Systems and Synthetic Biology, Vigo (Spain) May 2019
Optimal control of microbial growth and bioproduction Invited talk at SYMER workshop, Global Challenge Week, Univ Grenoble Alpes, Grenoble Jun 2019
Reengineering bacterial metabolism using synthetic biology and optimal control theory Invited talk in special session on Predictive approaches for biological systems engineering, JOBIM 2019, Nantes Jul 2019
Production of heterologous proteins by a synthetic microbial consortium: conditions and tradeoffs Invited talk at Biocore seminar, Peyresq Sep 2019

Stéphan Lacour

Table 18.
Title Event and location Date
New insights into the regulation of curli production by E. coli BactoGre workshop, Grenoble Avr 2019

Aline Marguet

Table 19.
Title Event and location Date
Inheritance and variability of kinetic gene expression parameters in microbial cells: Modelling and inference from lineage tree data Invited talk at École de printemps de la chaire MMB, Aussois May 2019
Inheritance and variability of kinetic gene expression parameters in microbial cells: Modelling and inference from lineage tree data Presentation at ISMB/ECCB conference, Basel (Switzerland) Jul 2019
Inheritance and variability of kinetic gene expression parameters in microbial cells: Modelling and inference from lineage tree data Invited talk at Biohasard 2019 workshop, Rennes Aug 2019
Inheritance and variability of kinetic gene expression parameters in microbial cells: Modelling and inference from lineage tree data Presentation at Journée Inria-Bio, Lyon Oct 2019
Inheritance and variability of kinetic gene expression parameters in microbial cells: Modelling and inference from lineage tree data Seminar Master Mathématiques pour les Sciences du Vivant, Ecole Polytechnique, Palaiseau Oct 2019
Modelling and statistics of branching processes Workshop on Growth and division in mathematics and medicine, London (UK) Nov 2019
Inheritance and variability of kinetic gene expression parameters in microbial cells: Modelling and inference from lineage tree data Seminar équipe-projet DRACULA, Lyon Nov 2019
Inheritance and variability of kinetic gene expression parameters in microbial cells: Modelling and inference from lineage tree data Seminar unité MaIage, Jouy-en-Josas Dec 2019
Long time behavior of a general class of branching Markov processes Seminar Institut Fourier, Grenoble Dec 2019

Marco Mauri

Table 20.
Title Event and location Date

Thibault Etienne

Table 21.
Title Event and location Date
Regulatory mechanisms underlying coordination of mRNA degradation and cell physiology in Escherichia coli Seminar during Journée annuelle du LIPhy, Grenoble Jun 2019
Large scale modelling of mRNA decay in Escherichia coli Seminar during Journée InriaBio, ENS de Lyon Oct 2019

Antrea Pavlou

Table 22.
Title Event and location Date
Experimental and computational analysis of bacterial self-replicators Poster at CompSysBio: Advanced Lecture Course on Computational Systems Biology, Aussois Apr 2019
Experimental and computational analysis of bacterial self-replicators Seminar for GdT MathBio, Grenoble Nov 2019

Research administration

Table 23.
IBIS member Committee Role
Eugenio Cinquemani Inria Grenoble - Rhône-Alpes Member Comité des Emplois Scientifiques (CES)
Eugenio Cinquemani Inria Grenoble - Rhône-Alpes Member Comité des Utilisateurs des Moyens Informatiques (CUMI)
Eugenio Cinquemani Inria Member Comité Administrative Paritaire (CAP)
Eugenio Cinquemani Inria Grenoble - Rhône-Alpes Member Comité Développement Technologique (CDT)
Hidde de Jong Inria Grenoble - Rhône-Alpes Member scientific council (COS)
Hidde de Jong Inria Member working group on International Relations of Conseil d'Orientation Scientifique et Technique (COST)
Delphine Ropers Inria Member of Commission d'évaluation d'Inria
Delphine Ropers Inria Grenoble - Rhône-Alpes Référente chercheurs
Delphine Ropers Inria Grenoble - Rhône-Alpes Co-coordinator of mentoring program

Recruitment committees

Table 24.
IBIS member Organism Recruitment
Johannes Geiselmann University of Barcelona Assistant professor
Delphine Ropers Inria Bordeaux Sud-Ouest Chargés de recherche (jury d'admissibilité)
Delphine Ropers Inria national Chargés de recherche (jury d'admissibilité)
Delphine Ropers Univ de Rennes Assistant professor