Section: Software and Platforms

TFM-Explorer – Identification and analysis of transcription factor binding sites

Actively maintained.

Software self-assessment: A-4, SO-3, SM-2, EM-3, SDL-4, DA-4, CD-4, MS-4, TPM-4

Software web site : http://bioinfo.lifl.fr/TFM/

Licence: GPL

The TFM suite is a set of tools for analysis of transcription factor binding sites modeled by Position Weight Matrices. In this suite, the TFM-Explorer tool is designed to analyze regulatory regions of eukaryotic genomes using comparative genomics and local over-representation.