Section: New Software and Platforms

TMA-Lib

Keywords: Photonic imaging - Fluorescence microscopy - Biomedical imaging - Image processing

Functional Description: The TMA-LIB enables to jointly detect suing adaptive wavelet transform, segment with parametric active contours and restore (i.e., artifact correction and deconvolution) TMA (Tissue MicroArrays) images.

• Participants: Cyril Cauchois, Vincent Paveau and Hoai Nam Nguyen

• Partner: Innopsys

• Contact: Charles Kervrann

• Publications: A variational method for dejittering large fluorescence line scanner images - Generalized Sparse Variation Regularization for Large Fluorescence Image Deconvolution - ATMAD : robust image analysis for Automatic Tissue MicroArray De-arraying